Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEC61A2Q9H9S3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEC61A2Q9H9S3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEC61A2Q9H9S3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEC61A2Q9H9S3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.08■□□□□ 0.65
SEC61A2Q9H9S3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEC61A2Q9H9S3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SEC61A2Q9H9S3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.08■□□□□ 0.64
SEC61A2Q9H9S3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 TSPY26P-201ENST00000476365 1326 ntBASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 FAM99A-202ENST00000538190 1989 ntBASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEC61A2Q9H9S3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEC61A2Q9H9S3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEC61A2Q9H9S3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 IGHV3-19-201ENST00000521488 291 ntBASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A2Q9H9S3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A2Q9H9S3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms