Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 AC073210.2-201ENST00000430369 194 ntBASIC22.08■■□□□ 1.13
BRD9Q9H8M2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
BRD9Q9H8M2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.08■■□□□ 1.13
BRD9Q9H8M2 AC013268.1-206ENST00000638368 961 ntBASIC22.08■■□□□ 1.13
BRD9Q9H8M2 AC112229.1-201ENST00000639295 961 ntBASIC22.08■■□□□ 1.13
BRD9Q9H8M2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.08■■□□□ 1.13
BRD9Q9H8M2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.08■■□□□ 1.12
BRD9Q9H8M2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
BRD9Q9H8M2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.08■■□□□ 1.12
BRD9Q9H8M2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.08■■□□□ 1.12
BRD9Q9H8M2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
BRD9Q9H8M2 OR7E47P-201ENST00000546390 1422 ntBASIC22.07■■□□□ 1.12
BRD9Q9H8M2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
BRD9Q9H8M2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
BRD9Q9H8M2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.07■■□□□ 1.12
BRD9Q9H8M2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.07■■□□□ 1.12
BRD9Q9H8M2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.07■■□□□ 1.12
BRD9Q9H8M2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
BRD9Q9H8M2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.07■■□□□ 1.12
BRD9Q9H8M2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
BRD9Q9H8M2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
BRD9Q9H8M2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BRD9Q9H8M2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
BRD9Q9H8M2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BRD9Q9H8M2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.06■■□□□ 1.12
BRD9Q9H8M2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.06■■□□□ 1.12
BRD9Q9H8M2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
BRD9Q9H8M2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BRD9Q9H8M2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
BRD9Q9H8M2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
BRD9Q9H8M2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
BRD9Q9H8M2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.05■■□□□ 1.12
BRD9Q9H8M2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
BRD9Q9H8M2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.05■■□□□ 1.12
BRD9Q9H8M2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.05■■□□□ 1.12
BRD9Q9H8M2 AC098934.4-201ENST00000564127 592 ntBASIC22.05■■□□□ 1.12
BRD9Q9H8M2 AL034346.1-201ENST00000568244 1277 ntBASIC22.05■■□□□ 1.12
BRD9Q9H8M2 MIR4758-201ENST00000577688 71 ntBASIC22.05■■□□□ 1.12
BRD9Q9H8M2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
BRD9Q9H8M2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
BRD9Q9H8M2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
BRD9Q9H8M2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 TERF1P5-201ENST00000477545 1207 ntBASIC22.04■■□□□ 1.12
BRD9Q9H8M2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BRD9Q9H8M2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 SLC7A5P1-201ENST00000568957 537 ntBASIC22.03■■□□□ 1.12
BRD9Q9H8M2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
BRD9Q9H8M2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.02■■□□□ 1.12
BRD9Q9H8M2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
BRD9Q9H8M2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
BRD9Q9H8M2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
BRD9Q9H8M2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
BRD9Q9H8M2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.02■■□□□ 1.11
BRD9Q9H8M2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.11
BRD9Q9H8M2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 CYP2T1P-201ENST00000432607 1285 ntBASIC22.01■■□□□ 1.11
BRD9Q9H8M2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BRD9Q9H8M2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms