Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF1Q9H7N4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
SCAF1Q9H7N4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 POU5F1P3-201ENST00000428824 1078 ntBASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 RPS2P52-201ENST00000469610 820 ntBASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 ITM2C-210ENST00000620962 501 ntBASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF1Q9H7N4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SCAF1Q9H7N4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SCAF1Q9H7N4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.52■■■□□ 2.64
SCAF1Q9H7N4 AL050303.2-201ENST00000619798 666 ntBASIC31.52■■■□□ 2.64
SCAF1Q9H7N4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.52■■■□□ 2.64
SCAF1Q9H7N4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.52■■■□□ 2.64
SCAF1Q9H7N4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
SCAF1Q9H7N4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC31.52■■■□□ 2.64
SCAF1Q9H7N4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
SCAF1Q9H7N4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SCAF1Q9H7N4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
SCAF1Q9H7N4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC31.51■■■□□ 2.64
SCAF1Q9H7N4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC31.51■■■□□ 2.64
SCAF1Q9H7N4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
SCAF1Q9H7N4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
SCAF1Q9H7N4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
SCAF1Q9H7N4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SCAF1Q9H7N4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
SCAF1Q9H7N4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SCAF1Q9H7N4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
SCAF1Q9H7N4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
SCAF1Q9H7N4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.51■■■□□ 2.63
SCAF1Q9H7N4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC31.51■■■□□ 2.63
SCAF1Q9H7N4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 DUX4L4-201ENST00000566884 1269 ntBASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SCAF1Q9H7N4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 SMUG1P1-201ENST00000590640 811 ntBASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 TPRG1LP1-201ENST00000598702 760 ntBASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 PRORSD1P-201ENST00000295112 541 ntBASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 SLC29A4P1-201ENST00000398760 971 ntBASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 KRT19P1-201ENST00000405746 1186 ntBASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SCAF1Q9H7N4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 GUSBP6-202ENST00000438529 1198 ntBASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SCAF1Q9H7N4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SCAF1Q9H7N4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
SCAF1Q9H7N4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms