Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 KRT18P5-201ENST00000436075 1291 ntBASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.8■■□□□ 1.08
RETREG1Q9H6L5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 AL162430.1-201ENST00000480705 870 ntBASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG1Q9H6L5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RETREG1Q9H6L5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG1Q9H6L5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG1Q9H6L5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG1Q9H6L5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.78■■□□□ 1.08
RETREG1Q9H6L5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG1Q9H6L5 KRT18P20-201ENST00000548986 1279 ntBASIC21.78■■□□□ 1.08
RETREG1Q9H6L5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.78■■□□□ 1.08
RETREG1Q9H6L5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG1Q9H6L5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG1Q9H6L5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 AC004854.2-201ENST00000608450 1441 ntBASIC21.77■■□□□ 1.08
RETREG1Q9H6L5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RETREG1Q9H6L5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RETREG1Q9H6L5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.77■■□□□ 1.07
RETREG1Q9H6L5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG1Q9H6L5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.76■■□□□ 1.07
RETREG1Q9H6L5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG1Q9H6L5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG1Q9H6L5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG1Q9H6L5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.76■■□□□ 1.07
RETREG1Q9H6L5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.76■■□□□ 1.07
RETREG1Q9H6L5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG1Q9H6L5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG1Q9H6L5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG1Q9H6L5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RETREG1Q9H6L5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 POU5F1P4-201ENST00000413175 1085 ntBASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 AC010141.2-201ENST00000452426 721 ntBASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms