Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL162430.1-201ENST00000480705 870 ntBASIC25.22■■□□□ 1.63
RNF41Q9H4P4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.22■■□□□ 1.63
RNF41Q9H4P4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RNF41Q9H4P4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
RNF41Q9H4P4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF41Q9H4P4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.22■■□□□ 1.63
RNF41Q9H4P4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF41Q9H4P4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 NTF6G-201ENST00000591094 616 ntBASIC25.21■■□□□ 1.63
RNF41Q9H4P4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.21■■□□□ 1.63
RNF41Q9H4P4 AC003102.1-202ENST00000563394 1796 ntBASIC25.21■■□□□ 1.63
RNF41Q9H4P4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
RNF41Q9H4P4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.2■■□□□ 1.62
RNF41Q9H4P4 AC026471.6-201ENST00000622954 1905 ntBASIC25.2■■□□□ 1.62
RNF41Q9H4P4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 KRT18P5-201ENST00000436075 1291 ntBASIC25.19■■□□□ 1.62
RNF41Q9H4P4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 AP004607.4-201ENST00000530158 1459 ntBASIC25.19■■□□□ 1.62
RNF41Q9H4P4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF41Q9H4P4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 EP400NL-214ENST00000641289 2402 ntBASIC25.18■■□□□ 1.62
RNF41Q9H4P4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 AC004854.2-201ENST00000608450 1441 ntBASIC25.18■■□□□ 1.62
RNF41Q9H4P4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.18■■□□□ 1.62
RNF41Q9H4P4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RNF41Q9H4P4 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.17■■□□□ 1.62
RNF41Q9H4P4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.17■■□□□ 1.62
RNF41Q9H4P4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.17■■□□□ 1.62
RNF41Q9H4P4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.17■■□□□ 1.62
RNF41Q9H4P4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
RNF41Q9H4P4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RNF41Q9H4P4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RNF41Q9H4P4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
RNF41Q9H4P4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF41Q9H4P4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF41Q9H4P4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF41Q9H4P4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF41Q9H4P4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF41Q9H4P4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF41Q9H4P4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF41Q9H4P4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.16■■□□□ 1.62
RNF41Q9H4P4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF41Q9H4P4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF41Q9H4P4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF41Q9H4P4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
RNF41Q9H4P4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.15■■□□□ 1.62
RNF41Q9H4P4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.15■■□□□ 1.62
RNF41Q9H4P4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.15■■□□□ 1.62
RNF41Q9H4P4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.15■■□□□ 1.62
RNF41Q9H4P4 EEF1DP3-203ENST00000566025 782 ntBASIC25.15■■□□□ 1.62
RNF41Q9H4P4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF41Q9H4P4 AC010542.4-201ENST00000563151 1910 ntBASIC25.15■■□□□ 1.62
RNF41Q9H4P4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms