Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALX4Q9H161 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ALX4Q9H161 AC104564.3-201ENST00000582367 638 ntBASIC17.98■□□□□ 0.47
ALX4Q9H161 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.98■□□□□ 0.47
ALX4Q9H161 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.98■□□□□ 0.47
ALX4Q9H161 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALX4Q9H161 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ALX4Q9H161 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALX4Q9H161 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.98■□□□□ 0.47
ALX4Q9H161 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.98■□□□□ 0.47
ALX4Q9H161 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALX4Q9H161 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALX4Q9H161 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ALX4Q9H161 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALX4Q9H161 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALX4Q9H161 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ALX4Q9H161 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
ALX4Q9H161 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALX4Q9H161 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.97■□□□□ 0.47
ALX4Q9H161 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ALX4Q9H161 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALX4Q9H161 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.97■□□□□ 0.47
ALX4Q9H161 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.97■□□□□ 0.47
ALX4Q9H161 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALX4Q9H161 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALX4Q9H161 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALX4Q9H161 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALX4Q9H161 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.97■□□□□ 0.47
ALX4Q9H161 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ALX4Q9H161 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALX4Q9H161 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALX4Q9H161 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALX4Q9H161 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ALX4Q9H161 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALX4Q9H161 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALX4Q9H161 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALX4Q9H161 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.96■□□□□ 0.47
ALX4Q9H161 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALX4Q9H161 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ALX4Q9H161 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
ALX4Q9H161 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALX4Q9H161 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.96■□□□□ 0.47
ALX4Q9H161 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.96■□□□□ 0.47
ALX4Q9H161 DUX4L4-201ENST00000566884 1269 ntBASIC17.96■□□□□ 0.47
ALX4Q9H161 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ALX4Q9H161 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALX4Q9H161 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALX4Q9H161 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALX4Q9H161 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.96■□□□□ 0.47
ALX4Q9H161 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALX4Q9H161 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.96■□□□□ 0.47
ALX4Q9H161 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.96■□□□□ 0.46
ALX4Q9H161 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ALX4Q9H161 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ALX4Q9H161 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.95■□□□□ 0.46
ALX4Q9H161 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.95■□□□□ 0.46
ALX4Q9H161 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.95■□□□□ 0.46
ALX4Q9H161 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
ALX4Q9H161 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.95■□□□□ 0.46
ALX4Q9H161 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.95■□□□□ 0.46
ALX4Q9H161 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.95■□□□□ 0.46
ALX4Q9H161 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALX4Q9H161 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ALX4Q9H161 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALX4Q9H161 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.94■□□□□ 0.46
ALX4Q9H161 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALX4Q9H161 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ALX4Q9H161 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
ALX4Q9H161 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.94■□□□□ 0.46
ALX4Q9H161 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALX4Q9H161 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.94■□□□□ 0.46
ALX4Q9H161 UNC93B8-201ENST00000511903 705 ntBASIC17.94■□□□□ 0.46
ALX4Q9H161 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.94■□□□□ 0.46
ALX4Q9H161 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
ALX4Q9H161 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.94■□□□□ 0.46
ALX4Q9H161 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALX4Q9H161 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.94■□□□□ 0.46
ALX4Q9H161 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ALX4Q9H161 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.94■□□□□ 0.46
ALX4Q9H161 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
ALX4Q9H161 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.93■□□□□ 0.46
ALX4Q9H161 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.93■□□□□ 0.46
ALX4Q9H161 C17orf82-201ENST00000623772 1530 ntBASIC17.93■□□□□ 0.46
ALX4Q9H161 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.93■□□□□ 0.46
ALX4Q9H161 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.93■□□□□ 0.46
ALX4Q9H161 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALX4Q9H161 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.93■□□□□ 0.46
ALX4Q9H161 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
ALX4Q9H161 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ALX4Q9H161 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms