Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SPENQ96T58 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.41■□□□□ 0.7
SPENQ96T58 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPENQ96T58 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.41■□□□□ 0.7
SPENQ96T58 AC092068.2-201ENST00000590491 1708 ntBASIC19.41■□□□□ 0.7
SPENQ96T58 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.41■□□□□ 0.7
SPENQ96T58 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPENQ96T58 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPENQ96T58 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SPENQ96T58 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.4■□□□□ 0.7
SPENQ96T58 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.4■□□□□ 0.7
SPENQ96T58 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPENQ96T58 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SPENQ96T58 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.4■□□□□ 0.7
SPENQ96T58 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.4■□□□□ 0.7
SPENQ96T58 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SPENQ96T58 EEF1DP3-203ENST00000566025 782 ntBASIC19.4■□□□□ 0.7
SPENQ96T58 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPENQ96T58 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.4■□□□□ 0.7
SPENQ96T58 LINC00526-201ENST00000581067 1875 ntBASIC19.4■□□□□ 0.7
SPENQ96T58 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SPENQ96T58 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPENQ96T58 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.4■□□□□ 0.7
SPENQ96T58 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.39■□□□□ 0.7
SPENQ96T58 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
SPENQ96T58 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.39■□□□□ 0.7
SPENQ96T58 AC008550.1-201ENST00000511500 884 ntBASIC19.39■□□□□ 0.7
SPENQ96T58 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPENQ96T58 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.39■□□□□ 0.7
SPENQ96T58 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPENQ96T58 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SPENQ96T58 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPENQ96T58 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPENQ96T58 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPENQ96T58 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.39■□□□□ 0.69
SPENQ96T58 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.39■□□□□ 0.69
SPENQ96T58 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.39■□□□□ 0.69
SPENQ96T58 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPENQ96T58 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.39■□□□□ 0.69
SPENQ96T58 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.39■□□□□ 0.69
SPENQ96T58 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPENQ96T58 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPENQ96T58 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPENQ96T58 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPENQ96T58 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.38■□□□□ 0.69
SPENQ96T58 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPENQ96T58 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.38■□□□□ 0.69
SPENQ96T58 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPENQ96T58 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPENQ96T58 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.38■□□□□ 0.69
SPENQ96T58 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.38■□□□□ 0.69
SPENQ96T58 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.38■□□□□ 0.69
SPENQ96T58 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.38■□□□□ 0.69
SPENQ96T58 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.38■□□□□ 0.69
SPENQ96T58 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPENQ96T58 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPENQ96T58 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPENQ96T58 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.38■□□□□ 0.69
SPENQ96T58 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.38■□□□□ 0.69
SPENQ96T58 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPENQ96T58 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPENQ96T58 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.38■□□□□ 0.69
SPENQ96T58 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPENQ96T58 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.37■□□□□ 0.69
SPENQ96T58 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SPENQ96T58 AC091874.3-201ENST00000512672 1195 ntBASIC19.37■□□□□ 0.69
SPENQ96T58 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.37■□□□□ 0.69
SPENQ96T58 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SPENQ96T58 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SPENQ96T58 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.37■□□□□ 0.69
SPENQ96T58 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPENQ96T58 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.37■□□□□ 0.69
SPENQ96T58 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.37■□□□□ 0.69
SPENQ96T58 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.37■□□□□ 0.69
SPENQ96T58 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.37■□□□□ 0.69
SPENQ96T58 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
SPENQ96T58 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPENQ96T58 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPENQ96T58 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.36■□□□□ 0.69
SPENQ96T58 TERF1P5-201ENST00000477545 1207 ntBASIC19.36■□□□□ 0.69
SPENQ96T58 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.36■□□□□ 0.69
SPENQ96T58 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPENQ96T58 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.36■□□□□ 0.69
SPENQ96T58 AC068587.7-201ENST00000641602 218 ntBASIC19.36■□□□□ 0.69
SPENQ96T58 ANOS2P-203ENST00000472227 1816 ntBASIC19.36■□□□□ 0.69
SPENQ96T58 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SPENQ96T58 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SPENQ96T58 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPENQ96T58 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPENQ96T58 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
SPENQ96T58 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPENQ96T58 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPENQ96T58 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.36■□□□□ 0.69
SPENQ96T58 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPENQ96T58 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPENQ96T58 AC006058.3-201ENST00000606217 1069 ntBASIC19.36■□□□□ 0.69
SPENQ96T58 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.36■□□□□ 0.69
SPENQ96T58 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPENQ96T58 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPENQ96T58 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms