Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH15Q96QU1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH15Q96QU1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDH15Q96QU1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH15Q96QU1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDH15Q96QU1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH15Q96QU1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDH15Q96QU1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH15Q96QU1 BX276092.2-201ENST00000417668 665 ntBASIC20.97■□□□□ 0.95
PCDH15Q96QU1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH15Q96QU1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH15Q96QU1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH15Q96QU1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH15Q96QU1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH15Q96QU1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDH15Q96QU1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDH15Q96QU1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH15Q96QU1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH15Q96QU1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.96■□□□□ 0.95
PCDH15Q96QU1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH15Q96QU1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PCDH15Q96QU1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH15Q96QU1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 AC069236.1-201ENST00000604339 616 ntBASIC20.94■□□□□ 0.94
PCDH15Q96QU1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH15Q96QU1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 AC091874.3-201ENST00000512672 1195 ntBASIC20.93■□□□□ 0.94
PCDH15Q96QU1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 AC053503.5-201ENST00000601508 636 ntBASIC20.93■□□□□ 0.94
PCDH15Q96QU1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH15Q96QU1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 LINC00526-201ENST00000581067 1875 ntBASIC20.92■□□□□ 0.94
PCDH15Q96QU1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms