Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.46■□□□□ 0.87
CNTNAP3BQ96NU0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP3BQ96NU0 AC092803.2-201ENST00000564287 1899 ntBASIC20.45■□□□□ 0.86
CNTNAP3BQ96NU0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3BQ96NU0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3BQ96NU0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CNTNAP3BQ96NU0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3BQ96NU0 TSPY15P-201ENST00000457163 923 ntBASIC20.45■□□□□ 0.86
CNTNAP3BQ96NU0 AL121894.2-201ENST00000602977 491 ntBASIC20.45■□□□□ 0.86
CNTNAP3BQ96NU0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3BQ96NU0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.45■□□□□ 0.86
CNTNAP3BQ96NU0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3BQ96NU0 AC096887.2-201ENST00000623443 1957 ntBASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTNAP3BQ96NU0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 RN7SL471P-201ENST00000580476 299 ntBASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 AC055733.4-201ENST00000638462 1354 ntBASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 AC005224.4-201ENST00000583262 1652 ntBASIC20.42■□□□□ 0.86
CNTNAP3BQ96NU0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 AC007322.4-201ENST00000509611 723 ntBASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP3BQ96NU0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CNTNAP3BQ96NU0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3BQ96NU0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3BQ96NU0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.4■□□□□ 0.86
CNTNAP3BQ96NU0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.4■□□□□ 0.86
CNTNAP3BQ96NU0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.4■□□□□ 0.86
CNTNAP3BQ96NU0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3BQ96NU0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CNTNAP3BQ96NU0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3BQ96NU0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.39■□□□□ 0.86
CNTNAP3BQ96NU0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTNAP3BQ96NU0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CNTNAP3BQ96NU0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CNTNAP3BQ96NU0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTNAP3BQ96NU0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CNTNAP3BQ96NU0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms