Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC46A1Q96NT5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC46A1Q96NT5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC46A1Q96NT5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.45■□□□□ 0.86
SLC46A1Q96NT5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
SLC46A1Q96NT5 AC010536.3-201ENST00000620306 533 ntBASIC20.45■□□□□ 0.86
SLC46A1Q96NT5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
SLC46A1Q96NT5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC46A1Q96NT5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.44■□□□□ 0.86
SLC46A1Q96NT5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 AC138907.5-202ENST00000569484 235 ntBASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC46A1Q96NT5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 AC010141.2-201ENST00000452426 721 ntBASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC46A1Q96NT5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 MIR4758-201ENST00000577688 71 ntBASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC46A1Q96NT5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 POU5F1P3-201ENST00000428824 1078 ntBASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 AC098934.4-201ENST00000564127 592 ntBASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 C9orf163-202ENST00000624034 2573 ntBASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC46A1Q96NT5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.39■□□□□ 0.86
SLC46A1Q96NT5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SLC46A1Q96NT5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SLC46A1Q96NT5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC46A1Q96NT5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 AC093827.2-201ENST00000512654 315 ntBASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 AC008687.6-201ENST00000596318 630 ntBASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms