Protein–RNA interactions for Protein: Q96JQ0

DCHS1, Protocadherin-16, humanhuman

Predictions only

Length 3,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1Q96JQ0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DCHS1Q96JQ0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DCHS1Q96JQ0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DCHS1Q96JQ0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DCHS1Q96JQ0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 PRKY-204ENST00000533551 1019 ntBASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 AL162412.1-201ENST00000567129 965 ntBASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DCHS1Q96JQ0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
DCHS1Q96JQ0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 AC010141.3-201ENST00000456659 717 ntBASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DCHS1Q96JQ0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DCHS1Q96JQ0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
DCHS1Q96JQ0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
DCHS1Q96JQ0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.7■□□□□ 0.9
DCHS1Q96JQ0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DCHS1Q96JQ0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.7■□□□□ 0.9
DCHS1Q96JQ0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.7■□□□□ 0.9
DCHS1Q96JQ0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DCHS1Q96JQ0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
DCHS1Q96JQ0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 AL161729.1-201ENST00000604104 1402 ntBASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.69■□□□□ 0.9
DCHS1Q96JQ0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DCHS1Q96JQ0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms