Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.28■□□□□ 0.84
ITCHQ96J02 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.28■□□□□ 0.84
ITCHQ96J02 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.28■□□□□ 0.84
ITCHQ96J02 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITCHQ96J02 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITCHQ96J02 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITCHQ96J02 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITCHQ96J02 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ITCHQ96J02 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITCHQ96J02 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.27■□□□□ 0.84
ITCHQ96J02 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
ITCHQ96J02 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.27■□□□□ 0.84
ITCHQ96J02 AL035685.1-201ENST00000636663 812 ntBASIC20.27■□□□□ 0.84
ITCHQ96J02 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.27■□□□□ 0.84
ITCHQ96J02 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITCHQ96J02 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITCHQ96J02 OXCT2P1-201ENST00000447263 1535 ntBASIC20.27■□□□□ 0.83
ITCHQ96J02 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ITCHQ96J02 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITCHQ96J02 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.26■□□□□ 0.83
ITCHQ96J02 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ITCHQ96J02 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.26■□□□□ 0.83
ITCHQ96J02 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ITCHQ96J02 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITCHQ96J02 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ITCHQ96J02 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.26■□□□□ 0.83
ITCHQ96J02 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITCHQ96J02 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITCHQ96J02 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ITCHQ96J02 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ITCHQ96J02 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITCHQ96J02 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.25■□□□□ 0.83
ITCHQ96J02 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITCHQ96J02 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.25■□□□□ 0.83
ITCHQ96J02 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ITCHQ96J02 AL034346.1-201ENST00000568244 1277 ntBASIC20.25■□□□□ 0.83
ITCHQ96J02 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ITCHQ96J02 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.25■□□□□ 0.83
ITCHQ96J02 AC073130.3-201ENST00000624389 2278 ntBASIC20.25■□□□□ 0.83
ITCHQ96J02 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.25■□□□□ 0.83
ITCHQ96J02 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ITCHQ96J02 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITCHQ96J02 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
ITCHQ96J02 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.24■□□□□ 0.83
ITCHQ96J02 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITCHQ96J02 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITCHQ96J02 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITCHQ96J02 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.24■□□□□ 0.83
ITCHQ96J02 GUSBP5-201ENST00000418136 578 ntBASIC20.24■□□□□ 0.83
ITCHQ96J02 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.24■□□□□ 0.83
ITCHQ96J02 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
ITCHQ96J02 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.24■□□□□ 0.83
ITCHQ96J02 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITCHQ96J02 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.24■□□□□ 0.83
ITCHQ96J02 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITCHQ96J02 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ITCHQ96J02 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITCHQ96J02 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITCHQ96J02 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITCHQ96J02 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITCHQ96J02 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITCHQ96J02 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITCHQ96J02 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.23■□□□□ 0.83
ITCHQ96J02 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ITCHQ96J02 AC010525.1-201ENST00000585559 441 ntBASIC20.23■□□□□ 0.83
ITCHQ96J02 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.23■□□□□ 0.83
ITCHQ96J02 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITCHQ96J02 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITCHQ96J02 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.23■□□□□ 0.83
ITCHQ96J02 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.22■□□□□ 0.83
ITCHQ96J02 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ITCHQ96J02 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ITCHQ96J02 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.22■□□□□ 0.83
ITCHQ96J02 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
ITCHQ96J02 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ITCHQ96J02 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ITCHQ96J02 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ITCHQ96J02 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITCHQ96J02 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITCHQ96J02 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.21■□□□□ 0.83
ITCHQ96J02 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITCHQ96J02 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ITCHQ96J02 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.21■□□□□ 0.83
ITCHQ96J02 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ITCHQ96J02 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.21■□□□□ 0.83
ITCHQ96J02 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms