Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM11Q96F44 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.56■■□□□ 1.2
TRIM11Q96F44 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 AP006587.3-201ENST00000525742 1516 ntBASIC22.56■■□□□ 1.2
TRIM11Q96F44 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM11Q96F44 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.55■■□□□ 1.2
TRIM11Q96F44 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM11Q96F44 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM11Q96F44 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.55■■□□□ 1.2
TRIM11Q96F44 AC096631.2-201ENST00000436136 790 ntBASIC22.55■■□□□ 1.2
TRIM11Q96F44 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.55■■□□□ 1.2
TRIM11Q96F44 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM11Q96F44 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.55■■□□□ 1.2
TRIM11Q96F44 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TRIM11Q96F44 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM11Q96F44 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM11Q96F44 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM11Q96F44 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM11Q96F44 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM11Q96F44 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM11Q96F44 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM11Q96F44 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
TRIM11Q96F44 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 PBX2P1-201ENST00000493219 1291 ntBASIC22.54■■□□□ 1.2
TRIM11Q96F44 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
TRIM11Q96F44 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.54■■□□□ 1.2
TRIM11Q96F44 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM11Q96F44 AC106739.1-201ENST00000617035 715 ntBASIC22.54■■□□□ 1.2
TRIM11Q96F44 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TRIM11Q96F44 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TRIM11Q96F44 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 AL137060.1-201ENST00000618151 2648 ntBASIC22.54■■□□□ 1.2
TRIM11Q96F44 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.54■■□□□ 1.2
TRIM11Q96F44 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM11Q96F44 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM11Q96F44 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM11Q96F44 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM11Q96F44 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM11Q96F44 AC003102.1-202ENST00000563394 1796 ntBASIC22.53■■□□□ 1.2
TRIM11Q96F44 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.53■■□□□ 1.2
TRIM11Q96F44 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM11Q96F44 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
TRIM11Q96F44 AC008764.7-201ENST00000593779 1081 ntBASIC22.53■■□□□ 1.2
TRIM11Q96F44 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM11Q96F44 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRIM11Q96F44 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM11Q96F44 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM11Q96F44 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
TRIM11Q96F44 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TRIM11Q96F44 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM11Q96F44 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM11Q96F44 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.52■■□□□ 1.2
TRIM11Q96F44 EDA-201ENST00000338901 1233 ntBASIC22.52■■□□□ 1.2
TRIM11Q96F44 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.52■■□□□ 1.2
TRIM11Q96F44 AC099791.1-201ENST00000416440 715 ntBASIC22.52■■□□□ 1.2
TRIM11Q96F44 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM11Q96F44 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.52■■□□□ 1.2
TRIM11Q96F44 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.51■■□□□ 1.19
TRIM11Q96F44 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM11Q96F44 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM11Q96F44 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
TRIM11Q96F44 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM11Q96F44 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM11Q96F44 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
TRIM11Q96F44 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM11Q96F44 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM11Q96F44 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM11Q96F44 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM11Q96F44 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TRIM11Q96F44 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM11Q96F44 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.5■■□□□ 1.19
TRIM11Q96F44 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TRIM11Q96F44 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM11Q96F44 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM11Q96F44 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TRIM11Q96F44 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TRIM11Q96F44 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM11Q96F44 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM11Q96F44 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM11Q96F44 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM11Q96F44 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TRIM11Q96F44 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM11Q96F44 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM11Q96F44 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms