Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NMD3Q96D46 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
NMD3Q96D46 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
NMD3Q96D46 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NMD3Q96D46 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
NMD3Q96D46 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NMD3Q96D46 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NMD3Q96D46 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NMD3Q96D46 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.08■□□□□ 0.8
NMD3Q96D46 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.07■□□□□ 0.8
NMD3Q96D46 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.07■□□□□ 0.8
NMD3Q96D46 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 MIR6722-201ENST00000617286 78 ntBASIC20.07■□□□□ 0.8
NMD3Q96D46 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.07■□□□□ 0.8
NMD3Q96D46 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.07■□□□□ 0.8
NMD3Q96D46 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NMD3Q96D46 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.07■□□□□ 0.8
NMD3Q96D46 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
NMD3Q96D46 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NMD3Q96D46 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NMD3Q96D46 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
NMD3Q96D46 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NMD3Q96D46 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NMD3Q96D46 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.06■□□□□ 0.8
NMD3Q96D46 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NMD3Q96D46 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NMD3Q96D46 AC009299.2-201ENST00000482477 511 ntBASIC20.06■□□□□ 0.8
NMD3Q96D46 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.06■□□□□ 0.8
NMD3Q96D46 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.06■□□□□ 0.8
NMD3Q96D46 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.06■□□□□ 0.8
NMD3Q96D46 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
NMD3Q96D46 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NMD3Q96D46 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.06■□□□□ 0.8
NMD3Q96D46 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NMD3Q96D46 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NMD3Q96D46 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NMD3Q96D46 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.05■□□□□ 0.8
NMD3Q96D46 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NMD3Q96D46 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NMD3Q96D46 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NMD3Q96D46 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NMD3Q96D46 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.05■□□□□ 0.8
NMD3Q96D46 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.05■□□□□ 0.8
NMD3Q96D46 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NMD3Q96D46 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NMD3Q96D46 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NMD3Q96D46 AC244015.2-201ENST00000616358 1861 ntBASIC20.05■□□□□ 0.8
NMD3Q96D46 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.04■□□□□ 0.8
NMD3Q96D46 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.04■□□□□ 0.8
NMD3Q96D46 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NMD3Q96D46 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NMD3Q96D46 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NMD3Q96D46 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NMD3Q96D46 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NMD3Q96D46 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NMD3Q96D46 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.04■□□□□ 0.8
NMD3Q96D46 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.04■□□□□ 0.8
NMD3Q96D46 AC092028.1-203ENST00000608262 953 ntBASIC20.04■□□□□ 0.8
NMD3Q96D46 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.04■□□□□ 0.8
NMD3Q96D46 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
NMD3Q96D46 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NMD3Q96D46 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NMD3Q96D46 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.04■□□□□ 0.8
NMD3Q96D46 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.04■□□□□ 0.8
NMD3Q96D46 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NMD3Q96D46 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NMD3Q96D46 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NMD3Q96D46 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NMD3Q96D46 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.03■□□□□ 0.8
NMD3Q96D46 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NMD3Q96D46 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NMD3Q96D46 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NMD3Q96D46 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NMD3Q96D46 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.03■□□□□ 0.8
NMD3Q96D46 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NMD3Q96D46 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NMD3Q96D46 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NMD3Q96D46 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.03■□□□□ 0.8
NMD3Q96D46 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.03■□□□□ 0.8
NMD3Q96D46 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.03■□□□□ 0.8
NMD3Q96D46 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.03■□□□□ 0.8
NMD3Q96D46 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NMD3Q96D46 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NMD3Q96D46 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NMD3Q96D46 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.03■□□□□ 0.8
NMD3Q96D46 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NMD3Q96D46 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NMD3Q96D46 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NMD3Q96D46 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NMD3Q96D46 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms