Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GRAMD1AQ96CP6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.77■■□□□ 1.07
GRAMD1AQ96CP6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.07
GRAMD1AQ96CP6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GRAMD1AQ96CP6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.76■■□□□ 1.07
GRAMD1AQ96CP6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GRAMD1AQ96CP6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.76■■□□□ 1.07
GRAMD1AQ96CP6 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.76■■□□□ 1.07
GRAMD1AQ96CP6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GRAMD1AQ96CP6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.76■■□□□ 1.07
GRAMD1AQ96CP6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.76■■□□□ 1.07
GRAMD1AQ96CP6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.76■■□□□ 1.07
GRAMD1AQ96CP6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
GRAMD1AQ96CP6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GRAMD1AQ96CP6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GRAMD1AQ96CP6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GRAMD1AQ96CP6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
GRAMD1AQ96CP6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.75■■□□□ 1.07
GRAMD1AQ96CP6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GRAMD1AQ96CP6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GRAMD1AQ96CP6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.75■■□□□ 1.07
GRAMD1AQ96CP6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GRAMD1AQ96CP6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 AC092667.1-201ENST00000434301 2586 ntBASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GRAMD1AQ96CP6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GRAMD1AQ96CP6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
GRAMD1AQ96CP6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 LINC01521-201ENST00000504184 1943 ntBASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GRAMD1AQ96CP6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GRAMD1AQ96CP6 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.7■■□□□ 1.06
GRAMD1AQ96CP6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GRAMD1AQ96CP6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.7■■□□□ 1.06
GRAMD1AQ96CP6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms