Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS33AQ96AX1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS33AQ96AX1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 AC099791.2-201ENST00000605725 427 ntBASIC20.44■□□□□ 0.86
VPS33AQ96AX1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS33AQ96AX1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS33AQ96AX1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 AC104564.3-201ENST00000582367 638 ntBASIC20.42■□□□□ 0.86
VPS33AQ96AX1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS33AQ96AX1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS33AQ96AX1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS33AQ96AX1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS33AQ96AX1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.41■□□□□ 0.86
VPS33AQ96AX1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS33AQ96AX1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS33AQ96AX1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS33AQ96AX1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
VPS33AQ96AX1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS33AQ96AX1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
VPS33AQ96AX1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.4■□□□□ 0.86
VPS33AQ96AX1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS33AQ96AX1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS33AQ96AX1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.4■□□□□ 0.86
VPS33AQ96AX1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
VPS33AQ96AX1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.4■□□□□ 0.86
VPS33AQ96AX1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.4■□□□□ 0.86
VPS33AQ96AX1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS33AQ96AX1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS33AQ96AX1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VPS33AQ96AX1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
VPS33AQ96AX1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.39■□□□□ 0.86
VPS33AQ96AX1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.39■□□□□ 0.86
VPS33AQ96AX1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VPS33AQ96AX1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms