Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR572-201ENST00000384983 95 ntBASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.08■□□□□ 0.8
SIMC1Q8NDZ2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SIMC1Q8NDZ2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SIMC1Q8NDZ2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SIMC1Q8NDZ2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 ZNRF2P3-201ENST00000424200 374 ntBASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 AC105233.4-201ENST00000642045 216 ntBASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 AC010542.4-201ENST00000563151 1910 ntBASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 AP004607.7-201ENST00000527152 1677 ntBASIC20.07■□□□□ 0.8
SIMC1Q8NDZ2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SIMC1Q8NDZ2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.05■□□□□ 0.8
SIMC1Q8NDZ2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIMC1Q8NDZ2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.05■□□□□ 0.8
SIMC1Q8NDZ2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.05■□□□□ 0.8
SIMC1Q8NDZ2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SIMC1Q8NDZ2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIMC1Q8NDZ2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIMC1Q8NDZ2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SIMC1Q8NDZ2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SIMC1Q8NDZ2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SIMC1Q8NDZ2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 MIR6084-201ENST00000622012 110 ntBASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.04■□□□□ 0.8
SIMC1Q8NDZ2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SIMC1Q8NDZ2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIMC1Q8NDZ2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.03■□□□□ 0.8
SIMC1Q8NDZ2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SIMC1Q8NDZ2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIMC1Q8NDZ2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SIMC1Q8NDZ2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.03■□□□□ 0.8
SIMC1Q8NDZ2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIMC1Q8NDZ2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.03■□□□□ 0.8
SIMC1Q8NDZ2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.03■□□□□ 0.8
SIMC1Q8NDZ2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 IRS3P-201ENST00000223076 1006 ntBASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SIMC1Q8NDZ2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SIMC1Q8NDZ2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SIMC1Q8NDZ2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SIMC1Q8NDZ2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 RNF165-205ENST00000588679 2904 ntBASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms