Protein–RNA interactions for Protein: Q8NC96

NECAP1, Adaptin ear-binding coat-associated protein 1, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1Q8NC96 pRNA.11-201ENST00000618423 90 ntBASIC17.23■□□□□ 0.35
NECAP1Q8NC96 pRNA.13-201ENST00000619112 90 ntBASIC17.23■□□□□ 0.35
NECAP1Q8NC96 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.23■□□□□ 0.35
NECAP1Q8NC96 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.23■□□□□ 0.35
NECAP1Q8NC96 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NECAP1Q8NC96 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NECAP1Q8NC96 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 ESRRAP2-201ENST00000418437 1549 ntBASIC17.22■□□□□ 0.35
NECAP1Q8NC96 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 AL391422.3-201ENST00000603791 2761 ntBASIC17.22■□□□□ 0.35
NECAP1Q8NC96 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 AL136116.3-201ENST00000402907 1138 ntBASIC17.22■□□□□ 0.35
NECAP1Q8NC96 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 MIR3181-201ENST00000578512 73 ntBASIC17.22■□□□□ 0.35
NECAP1Q8NC96 AL138724.1-201ENST00000606771 1088 ntBASIC17.22■□□□□ 0.35
NECAP1Q8NC96 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NECAP1Q8NC96 AC133637.1-201ENST00000624115 1537 ntBASIC17.21■□□□□ 0.35
NECAP1Q8NC96 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 SYT6-210ENST00000641643 1587 ntBASIC17.21■□□□□ 0.35
NECAP1Q8NC96 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.21■□□□□ 0.35
NECAP1Q8NC96 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NECAP1Q8NC96 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NECAP1Q8NC96 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECAP1Q8NC96 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECAP1Q8NC96 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NECAP1Q8NC96 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECAP1Q8NC96 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECAP1Q8NC96 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.19■□□□□ 0.34
NECAP1Q8NC96 AC008406.3-201ENST00000620001 1374 ntBASIC17.19■□□□□ 0.34
NECAP1Q8NC96 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NECAP1Q8NC96 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.19■□□□□ 0.34
NECAP1Q8NC96 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms