Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C3orf56Q8N813 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.7■□□□□ 0.26
C3orf56Q8N813 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.7■□□□□ 0.26
C3orf56Q8N813 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C3orf56Q8N813 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C3orf56Q8N813 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.7■□□□□ 0.26
C3orf56Q8N813 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
C3orf56Q8N813 AC055733.4-201ENST00000638462 1354 ntBASIC16.7■□□□□ 0.26
C3orf56Q8N813 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C3orf56Q8N813 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C3orf56Q8N813 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.7■□□□□ 0.26
C3orf56Q8N813 ECEL1P3-201ENST00000427961 737 ntBASIC16.7■□□□□ 0.26
C3orf56Q8N813 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C3orf56Q8N813 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.7■□□□□ 0.26
C3orf56Q8N813 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C3orf56Q8N813 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.7■□□□□ 0.26
C3orf56Q8N813 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C3orf56Q8N813 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.7■□□□□ 0.26
C3orf56Q8N813 MYC-209ENST00000641252 345 ntBASIC16.7■□□□□ 0.26
C3orf56Q8N813 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
C3orf56Q8N813 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
C3orf56Q8N813 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C3orf56Q8N813 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C3orf56Q8N813 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C3orf56Q8N813 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.69■□□□□ 0.26
C3orf56Q8N813 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.69■□□□□ 0.26
C3orf56Q8N813 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
C3orf56Q8N813 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
C3orf56Q8N813 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C3orf56Q8N813 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
C3orf56Q8N813 AC091874.3-201ENST00000512672 1195 ntBASIC16.69■□□□□ 0.26
C3orf56Q8N813 AP003097.1-201ENST00000530657 1135 ntBASIC16.69■□□□□ 0.26
C3orf56Q8N813 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.69■□□□□ 0.26
C3orf56Q8N813 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
C3orf56Q8N813 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.69■□□□□ 0.26
C3orf56Q8N813 FAM197Y4-202ENST00000622692 608 ntBASIC16.69■□□□□ 0.26
C3orf56Q8N813 AC073648.6-201ENST00000641589 218 ntBASIC16.69■□□□□ 0.26
C3orf56Q8N813 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
C3orf56Q8N813 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C3orf56Q8N813 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C3orf56Q8N813 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C3orf56Q8N813 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C3orf56Q8N813 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C3orf56Q8N813 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C3orf56Q8N813 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C3orf56Q8N813 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.68■□□□□ 0.26
C3orf56Q8N813 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.68■□□□□ 0.26
C3orf56Q8N813 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.68■□□□□ 0.26
C3orf56Q8N813 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.68■□□□□ 0.26
C3orf56Q8N813 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.68■□□□□ 0.26
C3orf56Q8N813 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.68■□□□□ 0.26
C3orf56Q8N813 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.68■□□□□ 0.26
C3orf56Q8N813 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.68■□□□□ 0.26
C3orf56Q8N813 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 AC073912.3-201ENST00000624414 853 ntBASIC16.68■□□□□ 0.26
C3orf56Q8N813 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
C3orf56Q8N813 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C3orf56Q8N813 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
C3orf56Q8N813 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.67■□□□□ 0.26
C3orf56Q8N813 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C3orf56Q8N813 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C3orf56Q8N813 AC022211.4-201ENST00000625094 2161 ntBASIC16.67■□□□□ 0.26
C3orf56Q8N813 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C3orf56Q8N813 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.67■□□□□ 0.26
C3orf56Q8N813 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C3orf56Q8N813 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.67■□□□□ 0.26
C3orf56Q8N813 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.67■□□□□ 0.26
C3orf56Q8N813 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.67■□□□□ 0.26
C3orf56Q8N813 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C3orf56Q8N813 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
C3orf56Q8N813 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C3orf56Q8N813 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C3orf56Q8N813 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C3orf56Q8N813 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C3orf56Q8N813 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
C3orf56Q8N813 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C3orf56Q8N813 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C3orf56Q8N813 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C3orf56Q8N813 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.66■□□□□ 0.26
C3orf56Q8N813 FAM210CP-201ENST00000445714 574 ntBASIC16.66■□□□□ 0.26
C3orf56Q8N813 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.66■□□□□ 0.26
C3orf56Q8N813 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.66■□□□□ 0.26
C3orf56Q8N813 UNC93B5-201ENST00000530315 699 ntBASIC16.66■□□□□ 0.26
C3orf56Q8N813 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C3orf56Q8N813 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.66■□□□□ 0.26
C3orf56Q8N813 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
C3orf56Q8N813 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C3orf56Q8N813 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C3orf56Q8N813 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms