Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCNYL1Q8N7R7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CCNYL1Q8N7R7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
CCNYL1Q8N7R7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCNYL1Q8N7R7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCNYL1Q8N7R7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.02■□□□□ 0.95
CCNYL1Q8N7R7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 AC087239.1-201ENST00000622671 572 ntBASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 AL035685.1-201ENST00000636663 812 ntBASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 AC068587.7-201ENST00000641602 218 ntBASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.01■□□□□ 0.95
CCNYL1Q8N7R7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 SRD5A1P1-201ENST00000442297 786 ntBASIC21■□□□□ 0.95
CCNYL1Q8N7R7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 MIR3621-201ENST00000580529 85 ntBASIC21■□□□□ 0.95
CCNYL1Q8N7R7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 RASSF1-AS1-201ENST00000629828 790 ntBASIC21■□□□□ 0.95
CCNYL1Q8N7R7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCNYL1Q8N7R7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCNYL1Q8N7R7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.98■□□□□ 0.95
CCNYL1Q8N7R7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL1Q8N7R7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL1Q8N7R7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL1Q8N7R7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCNYL1Q8N7R7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.98■□□□□ 0.95
CCNYL1Q8N7R7 OR2I1P-207ENST00000453522 948 ntBASIC20.98■□□□□ 0.95
CCNYL1Q8N7R7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL1Q8N7R7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNYL1Q8N7R7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCNYL1Q8N7R7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 AC010141.3-201ENST00000456659 717 ntBASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 AC010525.1-201ENST00000585559 441 ntBASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNYL1Q8N7R7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 GUSBP5-201ENST00000418136 578 ntBASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNYL1Q8N7R7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCNYL1Q8N7R7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL1Q8N7R7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNYL1Q8N7R7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms