Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 AL050303.2-201ENST00000619798 666 ntBASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 AC104771.1-201ENST00000603335 964 ntBASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
TTC9BQ8N6N2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC9BQ8N6N2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.48■■□□□ 1.19
TTC9BQ8N6N2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TTC9BQ8N6N2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC9BQ8N6N2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.48■■□□□ 1.19
TTC9BQ8N6N2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC9BQ8N6N2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC9BQ8N6N2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.48■■□□□ 1.19
TTC9BQ8N6N2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC9BQ8N6N2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TTC9BQ8N6N2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC9BQ8N6N2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TTC9BQ8N6N2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TTC9BQ8N6N2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC9BQ8N6N2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC9BQ8N6N2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC9BQ8N6N2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TTC9BQ8N6N2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.47■■□□□ 1.19
TTC9BQ8N6N2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TTC9BQ8N6N2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TTC9BQ8N6N2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.46■■□□□ 1.19
TTC9BQ8N6N2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TTC9BQ8N6N2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TTC9BQ8N6N2 SLC7A5P2-201ENST00000553010 536 ntBASIC22.46■■□□□ 1.19
TTC9BQ8N6N2 AC053503.5-201ENST00000601508 636 ntBASIC22.46■■□□□ 1.19
TTC9BQ8N6N2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.46■■□□□ 1.19
TTC9BQ8N6N2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.46■■□□□ 1.19
TTC9BQ8N6N2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 NCF1B-203ENST00000435988 1254 ntBASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 AC026471.6-201ENST00000622954 1905 ntBASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.45■■□□□ 1.18
TTC9BQ8N6N2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 CNN2P6-201ENST00000439038 900 ntBASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TTC9BQ8N6N2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.43■■□□□ 1.18
TTC9BQ8N6N2 AC127496.7-201ENST00000625110 1798 ntBASIC22.43■■□□□ 1.18
TTC9BQ8N6N2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.43■■□□□ 1.18
TTC9BQ8N6N2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.43■■□□□ 1.18
TTC9BQ8N6N2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TTC9BQ8N6N2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TTC9BQ8N6N2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms