Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.33■□□□□ 0.84
CARFQ8N187 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.32■□□□□ 0.84
CARFQ8N187 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CARFQ8N187 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CARFQ8N187 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.32■□□□□ 0.84
CARFQ8N187 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CARFQ8N187 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.32■□□□□ 0.84
CARFQ8N187 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CARFQ8N187 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CARFQ8N187 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CARFQ8N187 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CARFQ8N187 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.32■□□□□ 0.84
CARFQ8N187 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CARFQ8N187 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.32■□□□□ 0.84
CARFQ8N187 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.32■□□□□ 0.84
CARFQ8N187 DUX4L16-201ENST00000555130 1264 ntBASIC20.32■□□□□ 0.84
CARFQ8N187 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.32■□□□□ 0.84
CARFQ8N187 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.32■□□□□ 0.84
CARFQ8N187 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CARFQ8N187 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CARFQ8N187 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CARFQ8N187 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.31■□□□□ 0.84
CARFQ8N187 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CARFQ8N187 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.31■□□□□ 0.84
CARFQ8N187 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CARFQ8N187 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.31■□□□□ 0.84
CARFQ8N187 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CARFQ8N187 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.31■□□□□ 0.84
CARFQ8N187 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.31■□□□□ 0.84
CARFQ8N187 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.31■□□□□ 0.84
CARFQ8N187 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CARFQ8N187 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.31■□□□□ 0.84
CARFQ8N187 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CARFQ8N187 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CARFQ8N187 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.31■□□□□ 0.84
CARFQ8N187 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.3■□□□□ 0.84
CARFQ8N187 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.3■□□□□ 0.84
CARFQ8N187 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.3■□□□□ 0.84
CARFQ8N187 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CARFQ8N187 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.3■□□□□ 0.84
CARFQ8N187 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.3■□□□□ 0.84
CARFQ8N187 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CARFQ8N187 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.3■□□□□ 0.84
CARFQ8N187 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CARFQ8N187 KRT16P2-201ENST00000414673 1423 ntBASIC20.3■□□□□ 0.84
CARFQ8N187 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CARFQ8N187 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CARFQ8N187 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CARFQ8N187 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.3■□□□□ 0.84
CARFQ8N187 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CARFQ8N187 AC010536.3-201ENST00000620306 533 ntBASIC20.3■□□□□ 0.84
CARFQ8N187 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.3■□□□□ 0.84
CARFQ8N187 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CARFQ8N187 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CARFQ8N187 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CARFQ8N187 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CARFQ8N187 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CARFQ8N187 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CARFQ8N187 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CARFQ8N187 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.29■□□□□ 0.84
CARFQ8N187 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CARFQ8N187 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CARFQ8N187 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.29■□□□□ 0.84
CARFQ8N187 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CARFQ8N187 AC007322.1-201ENST00000426983 750 ntBASIC20.29■□□□□ 0.84
CARFQ8N187 AC006970.2-201ENST00000450065 779 ntBASIC20.29■□□□□ 0.84
CARFQ8N187 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.29■□□□□ 0.84
CARFQ8N187 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.29■□□□□ 0.84
CARFQ8N187 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CARFQ8N187 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.29■□□□□ 0.84
CARFQ8N187 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CARFQ8N187 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.29■□□□□ 0.84
CARFQ8N187 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CARFQ8N187 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CARFQ8N187 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARFQ8N187 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARFQ8N187 AC080038.3-201ENST00000623346 1952 ntBASIC20.28■□□□□ 0.84
CARFQ8N187 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARFQ8N187 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARFQ8N187 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.28■□□□□ 0.84
CARFQ8N187 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.28■□□□□ 0.84
CARFQ8N187 CROCCP5-201ENST00000436658 830 ntBASIC20.28■□□□□ 0.84
CARFQ8N187 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CARFQ8N187 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CARFQ8N187 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.28■□□□□ 0.84
CARFQ8N187 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.28■□□□□ 0.84
CARFQ8N187 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.28■□□□□ 0.84
CARFQ8N187 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARFQ8N187 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.28■□□□□ 0.84
CARFQ8N187 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARFQ8N187 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.28■□□□□ 0.84
CARFQ8N187 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARFQ8N187 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CARFQ8N187 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARFQ8N187 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CARFQ8N187 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CARFQ8N187 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CARFQ8N187 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CARFQ8N187 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CARFQ8N187 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms