Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SMC5Q8IY18 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.51■■□□□ 1.83
SMC5Q8IY18 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.51■■□□□ 1.83
SMC5Q8IY18 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.51■■□□□ 1.83
SMC5Q8IY18 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SMC5Q8IY18 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SMC5Q8IY18 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SMC5Q8IY18 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SMC5Q8IY18 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.5■■□□□ 1.83
SMC5Q8IY18 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SMC5Q8IY18 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.5■■□□□ 1.83
SMC5Q8IY18 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.5■■□□□ 1.83
SMC5Q8IY18 AC106739.1-201ENST00000617035 715 ntBASIC26.5■■□□□ 1.83
SMC5Q8IY18 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.5■■□□□ 1.83
SMC5Q8IY18 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SMC5Q8IY18 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
SMC5Q8IY18 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
SMC5Q8IY18 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SMC5Q8IY18 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMC5Q8IY18 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.49■■□□□ 1.83
SMC5Q8IY18 AC008406.3-201ENST00000620001 1374 ntBASIC26.49■■□□□ 1.83
SMC5Q8IY18 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.49■■□□□ 1.83
SMC5Q8IY18 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMC5Q8IY18 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.49■■□□□ 1.83
SMC5Q8IY18 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.49■■□□□ 1.83
SMC5Q8IY18 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.49■■□□□ 1.83
SMC5Q8IY18 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
SMC5Q8IY18 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMC5Q8IY18 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMC5Q8IY18 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.48■■□□□ 1.83
SMC5Q8IY18 AC126544.1-201ENST00000580842 1059 ntBASIC26.48■■□□□ 1.83
SMC5Q8IY18 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.48■■□□□ 1.83
SMC5Q8IY18 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.48■■□□□ 1.83
SMC5Q8IY18 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.48■■□□□ 1.83
SMC5Q8IY18 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SMC5Q8IY18 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.48■■□□□ 1.83
SMC5Q8IY18 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMC5Q8IY18 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.47■■□□□ 1.83
SMC5Q8IY18 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.47■■□□□ 1.83
SMC5Q8IY18 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.47■■□□□ 1.83
SMC5Q8IY18 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.47■■□□□ 1.83
SMC5Q8IY18 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.47■■□□□ 1.83
SMC5Q8IY18 AC008764.7-201ENST00000593779 1081 ntBASIC26.47■■□□□ 1.83
SMC5Q8IY18 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.47■■□□□ 1.83
SMC5Q8IY18 AC110285.6-201ENST00000617652 491 ntBASIC26.47■■□□□ 1.83
SMC5Q8IY18 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SMC5Q8IY18 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMC5Q8IY18 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SMC5Q8IY18 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SMC5Q8IY18 AC099791.1-201ENST00000416440 715 ntBASIC26.46■■□□□ 1.83
SMC5Q8IY18 PBX2P1-201ENST00000493219 1291 ntBASIC26.46■■□□□ 1.83
SMC5Q8IY18 AP001330.3-201ENST00000520123 633 ntBASIC26.46■■□□□ 1.83
SMC5Q8IY18 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.46■■□□□ 1.83
SMC5Q8IY18 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.46■■□□□ 1.83
SMC5Q8IY18 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SMC5Q8IY18 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC26.46■■□□□ 1.83
SMC5Q8IY18 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SMC5Q8IY18 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SMC5Q8IY18 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SMC5Q8IY18 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SMC5Q8IY18 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26.45■■□□□ 1.82
SMC5Q8IY18 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SMC5Q8IY18 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
SMC5Q8IY18 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SMC5Q8IY18 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.45■■□□□ 1.82
SMC5Q8IY18 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.45■■□□□ 1.82
SMC5Q8IY18 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SMC5Q8IY18 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.45■■□□□ 1.82
SMC5Q8IY18 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SMC5Q8IY18 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.45■■□□□ 1.82
SMC5Q8IY18 AL031432.3-201ENST00000607698 485 ntBASIC26.45■■□□□ 1.82
SMC5Q8IY18 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.45■■□□□ 1.82
SMC5Q8IY18 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SMC5Q8IY18 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SMC5Q8IY18 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.45■■□□□ 1.82
SMC5Q8IY18 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SMC5Q8IY18 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMC5Q8IY18 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMC5Q8IY18 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMC5Q8IY18 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMC5Q8IY18 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMC5Q8IY18 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMC5Q8IY18 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMC5Q8IY18 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMC5Q8IY18 EDA-201ENST00000338901 1233 ntBASIC26.44■■□□□ 1.82
SMC5Q8IY18 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.44■■□□□ 1.82
SMC5Q8IY18 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.44■■□□□ 1.82
SMC5Q8IY18 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.44■■□□□ 1.82
SMC5Q8IY18 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.44■■□□□ 1.82
SMC5Q8IY18 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMC5Q8IY18 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SMC5Q8IY18 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.44■■□□□ 1.82
SMC5Q8IY18 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC26.44■■□□□ 1.82
SMC5Q8IY18 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC26.43■■□□□ 1.82
SMC5Q8IY18 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMC5Q8IY18 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMC5Q8IY18 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMC5Q8IY18 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
SMC5Q8IY18 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.43■■□□□ 1.82
SMC5Q8IY18 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms