Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.48■■□□□ 1.19
SCUBE3Q8IX30 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 MIR6821-201ENST00000617625 74 ntBASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 AC003102.1-202ENST00000563394 1796 ntBASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
SCUBE3Q8IX30 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SCUBE3Q8IX30 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 FBXW4P1-201ENST00000426721 2239 ntBASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 CCDC92B-201ENST00000575506 885 ntBASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 TERF1P2-201ENST00000583350 1212 ntBASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SCUBE3Q8IX30 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 AC087623.3-201ENST00000607047 1098 ntBASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.44■■□□□ 1.18
SCUBE3Q8IX30 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.43■■□□□ 1.18
SCUBE3Q8IX30 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 KRT18P14-201ENST00000534205 1250 ntBASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SCUBE3Q8IX30 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.41■■□□□ 1.18
SCUBE3Q8IX30 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms