Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 TSPY26P-201ENST00000476365 1326 ntBASIC19.93■□□□□ 0.78
CCDC71Q8IV32 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71Q8IV32 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC71Q8IV32 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC71Q8IV32 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71Q8IV32 AL157384.1-201ENST00000445995 2473 ntBASIC19.9■□□□□ 0.78
CCDC71Q8IV32 AF106564.1-201ENST00000607058 2553 ntBASIC19.9■□□□□ 0.78
CCDC71Q8IV32 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CCDC71Q8IV32 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC71Q8IV32 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC71Q8IV32 AC034268.1-201ENST00000441047 882 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms