Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRTM4Q86VH4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRTM4Q86VH4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 AC104187.1-201ENST00000607510 612 ntBASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 FAM99A-202ENST00000538190 1989 ntBASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRTM4Q86VH4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRTM4Q86VH4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
LRRTM4Q86VH4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 AC137761.2-201ENST00000561729 223 ntBASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 AC145350.3-201ENST00000569033 163 ntBASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 AL117328.2-201ENST00000624617 1940 ntBASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRTM4Q86VH4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms