Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 AC005837.3-201ENST00000612163 286 ntBASIC15.18■□□□□ 0.02
NFE4Q86UQ8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 LINC01521-201ENST00000504184 1943 ntBASIC15.17■□□□□ 0.02
NFE4Q86UQ8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 EDA-201ENST00000338901 1233 ntBASIC15.17■□□□□ 0.02
NFE4Q86UQ8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
NFE4Q86UQ8 AC009102.2-201ENST00000606772 1639 ntBASIC15.17■□□□□ 0.02
NFE4Q86UQ8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NFE4Q86UQ8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 AC142381.2-201ENST00000566120 298 ntBASIC15.15■□□□□ 0.02
NFE4Q86UQ8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 AL355001.2-201ENST00000620617 1191 ntBASIC15.15■□□□□ 0.02
NFE4Q86UQ8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NFE4Q86UQ8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.14■□□□□ 0.01
NFE4Q86UQ8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 C17orf82-201ENST00000623772 1530 ntBASIC15.14■□□□□ 0.01
NFE4Q86UQ8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NFE4Q86UQ8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms