Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14□□□□□ -0.17
SCXQ7RTU7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SCXQ7RTU7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SCXQ7RTU7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SCXQ7RTU7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC13.99□□□□□ -0.17
SCXQ7RTU7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SCXQ7RTU7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC13.99□□□□□ -0.17
SCXQ7RTU7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SCXQ7RTU7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 LINC02228-203ENST00000641970 1355 ntBASIC13.98□□□□□ -0.17
SCXQ7RTU7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 AC105233.4-201ENST00000642045 216 ntBASIC13.98□□□□□ -0.17
SCXQ7RTU7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SCXQ7RTU7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SCXQ7RTU7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 AC079630.1-202ENST00000618127 1840 ntBASIC13.97□□□□□ -0.17
SCXQ7RTU7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.97□□□□□ -0.17
SCXQ7RTU7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 KRT18P14-201ENST00000534205 1250 ntBASIC13.97□□□□□ -0.17
SCXQ7RTU7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCXQ7RTU7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.97□□□□□ -0.17
SCXQ7RTU7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCXQ7RTU7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCXQ7RTU7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCXQ7RTU7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCXQ7RTU7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCXQ7RTU7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCXQ7RTU7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCXQ7RTU7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.96□□□□□ -0.17
SCXQ7RTU7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms