Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF111Q6ZNA4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RNF111Q6ZNA4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF111Q6ZNA4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF111Q6ZNA4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF111Q6ZNA4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF111Q6ZNA4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF111Q6ZNA4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RNF111Q6ZNA4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF111Q6ZNA4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 AC011298.3-201ENST00000615796 283 ntBASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF111Q6ZNA4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF111Q6ZNA4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RNF111Q6ZNA4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF111Q6ZNA4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
RNF111Q6ZNA4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF111Q6ZNA4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.64■□□□□ 0.9
RNF111Q6ZNA4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 LINC01006-201ENST00000333319 2292 ntBASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 AC135279.3-201ENST00000610945 1311 ntBASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 AC110285.6-201ENST00000617652 491 ntBASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RNF111Q6ZNA4 AC133637.1-201ENST00000624115 1537 ntBASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 PBX2P1-201ENST00000493219 1291 ntBASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 AC024257.2-201ENST00000549699 147 ntBASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 AL139246.5-201ENST00000606645 996 ntBASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF111Q6ZNA4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF111Q6ZNA4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 AC106739.1-201ENST00000617035 715 ntBASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 AC136469.2-201ENST00000623944 1028 ntBASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.61■□□□□ 0.89
RNF111Q6ZNA4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF111Q6ZNA4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms