Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNKSR3Q6P9H4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 RPS2P52-201ENST00000469610 820 ntBASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR3Q6P9H4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.18■■□□□ 1.3
CNKSR3Q6P9H4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 DUSP5P2-201ENST00000426873 1033 ntBASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 AC098590.1-201ENST00000468126 897 ntBASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CNKSR3Q6P9H4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 ESRRAP1-201ENST00000400596 1257 ntBASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 POU5F1P4-201ENST00000413175 1085 ntBASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.16■■□□□ 1.3
CNKSR3Q6P9H4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 AL162412.1-201ENST00000567129 965 ntBASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 AP006294.2-201ENST00000641667 209 ntBASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CNKSR3Q6P9H4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CNKSR3Q6P9H4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.14■■□□□ 1.3
CNKSR3Q6P9H4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
CNKSR3Q6P9H4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.14■■□□□ 1.3
CNKSR3Q6P9H4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CNKSR3Q6P9H4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.14■■□□□ 1.29
CNKSR3Q6P9H4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.14■■□□□ 1.29
CNKSR3Q6P9H4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CNKSR3Q6P9H4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.14■■□□□ 1.29
CNKSR3Q6P9H4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.14■■□□□ 1.29
CNKSR3Q6P9H4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CNKSR3Q6P9H4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.14■■□□□ 1.29
CNKSR3Q6P9H4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
CNKSR3Q6P9H4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CNKSR3Q6P9H4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.13■■□□□ 1.29
CNKSR3Q6P9H4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNKSR3Q6P9H4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNKSR3Q6P9H4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNKSR3Q6P9H4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.13■■□□□ 1.29
CNKSR3Q6P9H4 GCSHP5-201ENST00000443090 522 ntBASIC23.13■■□□□ 1.29
CNKSR3Q6P9H4 AC091874.3-201ENST00000512672 1195 ntBASIC23.13■■□□□ 1.29
CNKSR3Q6P9H4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNKSR3Q6P9H4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.13■■□□□ 1.29
CNKSR3Q6P9H4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR3Q6P9H4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR3Q6P9H4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR3Q6P9H4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms