Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 ABHD17AP1-201ENST00000358206 933 ntBASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SHROOM1Q2M3G4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.08■■□□□ 1.6
SHROOM1Q2M3G4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SHROOM1Q2M3G4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
SHROOM1Q2M3G4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.07■■□□□ 1.6
SHROOM1Q2M3G4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 C1orf229-201ENST00000623686 2258 ntBASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SHROOM1Q2M3G4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.05■■□□□ 1.6
SHROOM1Q2M3G4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHROOM1Q2M3G4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.05■■□□□ 1.6
SHROOM1Q2M3G4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.05■■□□□ 1.6
SHROOM1Q2M3G4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.05■■□□□ 1.6
SHROOM1Q2M3G4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHROOM1Q2M3G4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.05■■□□□ 1.6
SHROOM1Q2M3G4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.05■■□□□ 1.6
SHROOM1Q2M3G4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHROOM1Q2M3G4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
SHROOM1Q2M3G4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHROOM1Q2M3G4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SHROOM1Q2M3G4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SHROOM1Q2M3G4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SHROOM1Q2M3G4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.04■■□□□ 1.6
SHROOM1Q2M3G4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SHROOM1Q2M3G4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SHROOM1Q2M3G4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 AL034346.1-201ENST00000568244 1277 ntBASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 AC053503.5-201ENST00000601508 636 ntBASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHROOM1Q2M3G4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 AC080038.3-201ENST00000623346 1952 ntBASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
SHROOM1Q2M3G4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 AC026471.6-201ENST00000622954 1905 ntBASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHROOM1Q2M3G4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms