Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 HLA-L-209ENST00000420110 1011 ntBASIC25.77■■□□□ 1.72
PDS5AQ29RF7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.77■■□□□ 1.72
PDS5AQ29RF7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDS5AQ29RF7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PDS5AQ29RF7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDS5AQ29RF7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.76■■□□□ 1.71
PDS5AQ29RF7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDS5AQ29RF7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDS5AQ29RF7 MIR663A-201ENST00000385250 93 ntBASIC25.76■■□□□ 1.71
PDS5AQ29RF7 NCF1B-203ENST00000435988 1254 ntBASIC25.76■■□□□ 1.71
PDS5AQ29RF7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PDS5AQ29RF7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.76■■□□□ 1.71
PDS5AQ29RF7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDS5AQ29RF7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
PDS5AQ29RF7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.75■■□□□ 1.71
PDS5AQ29RF7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.75■■□□□ 1.71
PDS5AQ29RF7 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.75■■□□□ 1.71
PDS5AQ29RF7 AC006970.2-201ENST00000450065 779 ntBASIC25.75■■□□□ 1.71
PDS5AQ29RF7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.75■■□□□ 1.71
PDS5AQ29RF7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.75■■□□□ 1.71
PDS5AQ29RF7 AC010536.3-201ENST00000620306 533 ntBASIC25.75■■□□□ 1.71
PDS5AQ29RF7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.75■■□□□ 1.71
PDS5AQ29RF7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PDS5AQ29RF7 AC080038.3-201ENST00000623346 1952 ntBASIC25.75■■□□□ 1.71
PDS5AQ29RF7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.75■■□□□ 1.71
PDS5AQ29RF7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PDS5AQ29RF7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.74■■□□□ 1.71
PDS5AQ29RF7 CNN2P6-201ENST00000439038 900 ntBASIC25.74■■□□□ 1.71
PDS5AQ29RF7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDS5AQ29RF7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PDS5AQ29RF7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PDS5AQ29RF7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.73■■□□□ 1.71
PDS5AQ29RF7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.73■■□□□ 1.71
PDS5AQ29RF7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
PDS5AQ29RF7 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.73■■□□□ 1.71
PDS5AQ29RF7 AL050303.2-201ENST00000619798 666 ntBASIC25.73■■□□□ 1.71
PDS5AQ29RF7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PDS5AQ29RF7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.73■■□□□ 1.71
PDS5AQ29RF7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.73■■□□□ 1.71
PDS5AQ29RF7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PDS5AQ29RF7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PDS5AQ29RF7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.72■■□□□ 1.71
PDS5AQ29RF7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PDS5AQ29RF7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDS5AQ29RF7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDS5AQ29RF7 POU5F1P4-201ENST00000413175 1085 ntBASIC25.71■■□□□ 1.71
PDS5AQ29RF7 AC007322.1-201ENST00000426983 750 ntBASIC25.71■■□□□ 1.71
PDS5AQ29RF7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.71■■□□□ 1.71
PDS5AQ29RF7 AC104771.1-201ENST00000603335 964 ntBASIC25.71■■□□□ 1.71
PDS5AQ29RF7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.71■■□□□ 1.71
PDS5AQ29RF7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
PDS5AQ29RF7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.71■■□□□ 1.71
PDS5AQ29RF7 AC003102.1-202ENST00000563394 1796 ntBASIC25.71■■□□□ 1.71
PDS5AQ29RF7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.71■■□□□ 1.71
PDS5AQ29RF7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDS5AQ29RF7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PDS5AQ29RF7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
PDS5AQ29RF7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
PDS5AQ29RF7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PDS5AQ29RF7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms