Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.96■□□□□ 0.95
CACNA1EQ15878 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.96■□□□□ 0.95
CACNA1EQ15878 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 KRT16P2-201ENST00000414673 1423 ntBASIC20.95■□□□□ 0.94
CACNA1EQ15878 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 DUSP5P2-201ENST00000426873 1033 ntBASIC20.95■□□□□ 0.94
CACNA1EQ15878 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.95■□□□□ 0.94
CACNA1EQ15878 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA1EQ15878 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1EQ15878 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1EQ15878 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1EQ15878 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1EQ15878 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1EQ15878 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1EQ15878 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA1EQ15878 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.94■□□□□ 0.94
CACNA1EQ15878 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CACNA1EQ15878 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1EQ15878 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1EQ15878 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1EQ15878 BX276092.2-201ENST00000417668 665 ntBASIC20.93■□□□□ 0.94
CACNA1EQ15878 UNC93B5-201ENST00000530315 699 ntBASIC20.93■□□□□ 0.94
CACNA1EQ15878 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.93■□□□□ 0.94
CACNA1EQ15878 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1EQ15878 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.93■□□□□ 0.94
CACNA1EQ15878 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1EQ15878 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.93■□□□□ 0.94
CACNA1EQ15878 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.93■□□□□ 0.94
CACNA1EQ15878 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1EQ15878 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1EQ15878 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1EQ15878 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1EQ15878 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA1EQ15878 ESRRAP1-201ENST00000400596 1257 ntBASIC20.93■□□□□ 0.94
CACNA1EQ15878 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.93■□□□□ 0.94
CACNA1EQ15878 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.93■□□□□ 0.94
CACNA1EQ15878 AC091874.3-201ENST00000512672 1195 ntBASIC20.93■□□□□ 0.94
CACNA1EQ15878 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.93■□□□□ 0.94
CACNA1EQ15878 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CACNA1EQ15878 AC008694.1-202ENST00000636953 945 ntBASIC20.93■□□□□ 0.94
CACNA1EQ15878 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CACNA1EQ15878 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1EQ15878 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.92■□□□□ 0.94
CACNA1EQ15878 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1EQ15878 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1EQ15878 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1EQ15878 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.92■□□□□ 0.94
CACNA1EQ15878 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1EQ15878 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1EQ15878 POU5F1P4-201ENST00000413175 1085 ntBASIC20.92■□□□□ 0.94
CACNA1EQ15878 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA1EQ15878 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.92■□□□□ 0.94
CACNA1EQ15878 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CACNA1EQ15878 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.92■□□□□ 0.94
CACNA1EQ15878 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.92■□□□□ 0.94
CACNA1EQ15878 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1EQ15878 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1EQ15878 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1EQ15878 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.91■□□□□ 0.94
CACNA1EQ15878 AL596275.1-201ENST00000423464 877 ntBASIC20.91■□□□□ 0.94
CACNA1EQ15878 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.91■□□□□ 0.94
CACNA1EQ15878 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA1EQ15878 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNA1EQ15878 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1EQ15878 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1EQ15878 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.9■□□□□ 0.94
CACNA1EQ15878 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNA1EQ15878 AC069236.1-201ENST00000604339 616 ntBASIC20.9■□□□□ 0.94
CACNA1EQ15878 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms