Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC138907.5-202ENST00000569484 235 ntBASIC18.22■□□□□ 0.51
EFNB3Q15768 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFNB3Q15768 AP001160.3-201ENST00000601484 763 ntBASIC18.22■□□□□ 0.51
EFNB3Q15768 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.22■□□□□ 0.51
EFNB3Q15768 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFNB3Q15768 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFNB3Q15768 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFNB3Q15768 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
EFNB3Q15768 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFNB3Q15768 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFNB3Q15768 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.21■□□□□ 0.51
EFNB3Q15768 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.21■□□□□ 0.51
EFNB3Q15768 AC010141.2-201ENST00000452426 721 ntBASIC18.21■□□□□ 0.51
EFNB3Q15768 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.21■□□□□ 0.51
EFNB3Q15768 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
EFNB3Q15768 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 EEF1DP3-203ENST00000566025 782 ntBASIC18.21■□□□□ 0.51
EFNB3Q15768 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 AC053503.5-201ENST00000601508 636 ntBASIC18.21■□□□□ 0.51
EFNB3Q15768 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.21■□□□□ 0.51
EFNB3Q15768 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EFNB3Q15768 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.21■□□□□ 0.51
EFNB3Q15768 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
EFNB3Q15768 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
EFNB3Q15768 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.2■□□□□ 0.5
EFNB3Q15768 AC127496.7-201ENST00000625110 1798 ntBASIC18.2■□□□□ 0.5
EFNB3Q15768 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFNB3Q15768 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EFNB3Q15768 KRT18P20-201ENST00000548986 1279 ntBASIC18.2■□□□□ 0.5
EFNB3Q15768 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.2■□□□□ 0.5
EFNB3Q15768 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.2■□□□□ 0.5
EFNB3Q15768 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFNB3Q15768 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.2■□□□□ 0.5
EFNB3Q15768 AC073111.5-205ENST00000641717 521 ntBASIC18.2■□□□□ 0.5
EFNB3Q15768 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.2■□□□□ 0.5
EFNB3Q15768 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFNB3Q15768 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
EFNB3Q15768 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
EFNB3Q15768 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFNB3Q15768 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
EFNB3Q15768 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFNB3Q15768 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EFNB3Q15768 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFNB3Q15768 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFNB3Q15768 CDCA4P2-201ENST00000441182 718 ntBASIC18.19■□□□□ 0.5
EFNB3Q15768 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.19■□□□□ 0.5
EFNB3Q15768 RAP2CP1-201ENST00000605103 478 ntBASIC18.19■□□□□ 0.5
EFNB3Q15768 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.19■□□□□ 0.5
EFNB3Q15768 AC011767.1-201ENST00000617410 1153 ntBASIC18.19■□□□□ 0.5
EFNB3Q15768 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.19■□□□□ 0.5
EFNB3Q15768 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EFNB3Q15768 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.19■□□□□ 0.5
EFNB3Q15768 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
EFNB3Q15768 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EFNB3Q15768 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.19■□□□□ 0.5
EFNB3Q15768 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
EFNB3Q15768 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.18■□□□□ 0.5
EFNB3Q15768 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.18■□□□□ 0.5
EFNB3Q15768 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
EFNB3Q15768 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
EFNB3Q15768 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
EFNB3Q15768 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.18■□□□□ 0.5
EFNB3Q15768 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.18■□□□□ 0.5
EFNB3Q15768 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.18■□□□□ 0.5
EFNB3Q15768 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.18■□□□□ 0.5
EFNB3Q15768 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.18■□□□□ 0.5
EFNB3Q15768 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.18■□□□□ 0.5
EFNB3Q15768 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.18■□□□□ 0.5
EFNB3Q15768 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EFNB3Q15768 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFNB3Q15768 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EFNB3Q15768 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFNB3Q15768 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFNB3Q15768 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFNB3Q15768 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EFNB3Q15768 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFNB3Q15768 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EFNB3Q15768 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EFNB3Q15768 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms