Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 DOS2YDR068W 933 nt2.47□□□□□ -2.01
HRD1Q08109 ERG26YGL001C 1050 nt2.47□□□□□ -2.01
HRD1Q08109 KXD1YGL079W 657 nt2.47□□□□□ -2.01
HRD1Q08109 PPX1YHR201C 1194 nt2.47□□□□□ -2.01
HRD1Q08109 MRPL49YJL096W 486 nt2.47□□□□□ -2.01
HRD1Q08109 YKR011CYKR011C 1062 nt2.47□□□□□ -2.01
HRD1Q08109 ENV10YLR065C 546 nt2.47□□□□□ -2.01
HRD1Q08109 YLR326WYLR326W 723 nt2.47□□□□□ -2.01
HRD1Q08109 YBL039W-BYBL039W-B 180 nt2.47□□□□□ -2.01
HRD1Q08109 AAR2YBL074C 1068 nt2.47□□□□□ -2.01
HRD1Q08109 DDI3YNL335W 678 nt2.47□□□□□ -2.01
HRD1Q08109 LCL1YPL056C 306 nt2.47□□□□□ -2.01
HRD1Q08109 YPL107WYPL107W 747 nt2.47□□□□□ -2.01
HRD1Q08109 YPR053CYPR053C 456 nt2.47□□□□□ -2.01
HRD1Q08109 ARO4YBR249C 1113 nt2.47□□□□□ -2.01
HRD1Q08109 MUM3YOR298W 1440 nt2.47□□□□□ -2.01
HRD1Q08109 YIG1YPL201C 1386 nt2.47□□□□□ -2.01
HRD1Q08109 HRD1YOL013C 1656 nt2.47□□□□□ -2.01
HRD1Q08109 RIX1YHR197W 2292 nt2.46□□□□□ -2.02
HRD1Q08109 BUD30YDL151C 582 nt2.46□□□□□ -2.02
HRD1Q08109 RRP8YDR083W 1179 nt2.46□□□□□ -2.02
HRD1Q08109 GCD6YDR211W 2139 nt2.46□□□□□ -2.02
HRD1Q08109 TAM41YGR046W 1158 nt2.46□□□□□ -2.02
HRD1Q08109 MAK16YAL025C 921 nt2.46□□□□□ -2.02
HRD1Q08109 MRPL16YBL038W 699 nt2.46□□□□□ -2.02
HRD1Q08109 MCA1YOR197W 1299 nt2.46□□□□□ -2.02
HRD1Q08109 HEH2YDR458C 1992 nt2.46□□□□□ -2.02
HRD1Q08109 CAF120YNL278W 3183 nt2.46□□□□□ -2.02
HRD1Q08109 CIK1YMR198W 1785 nt2.46□□□□□ -2.02
HRD1Q08109 THP2YHR167W 786 nt2.45□□□□□ -2.02
HRD1Q08109 YIL047C-AYIL047C-A 369 nt2.45□□□□□ -2.02
HRD1Q08109 SKG1YKR100C 1068 nt2.45□□□□□ -2.02
HRD1Q08109 YNL067W-AYNL067W-A 147 nt2.45□□□□□ -2.02
HRD1Q08109 YOR073W-AYOR073W-A 234 nt2.45□□□□□ -2.02
HRD1Q08109 YBR116CYBR116C 528 nt2.45□□□□□ -2.02
HRD1Q08109 PHO81YGR233C 3537 nt2.45□□□□□ -2.02
HRD1Q08109 YBL005W-BYBL005W-B 5268 nt2.44□□□□□ -2.02
HRD1Q08109 YKL222CYKL222C 2118 nt2.44□□□□□ -2.02
HRD1Q08109 EPL1YFL024C 2499 nt2.44□□□□□ -2.02
HRD1Q08109 VPS3YDR495C 3036 nt2.44□□□□□ -2.02
HRD1Q08109 YPL109CYPL109C 1974 nt2.44□□□□□ -2.02
HRD1Q08109 MRH1YDR033W 963 nt2.44□□□□□ -2.02
HRD1Q08109 SPT2YER161C 1002 nt2.44□□□□□ -2.02
HRD1Q08109 NDL1YLR254C 570 nt2.44□□□□□ -2.02
HRD1Q08109 RCE1YMR274C 948 nt2.44□□□□□ -2.02
HRD1Q08109 YPR136CYPR136C 513 nt2.44□□□□□ -2.02
HRD1Q08109 NUM1YDR150W 8247 nt2.44□□□□□ -2.02
HRD1Q08109 CIN1YOR349W 3045 nt2.44□□□□□ -2.02
HRD1Q08109 ATG13YPR185W 2217 nt2.44□□□□□ -2.02
HRD1Q08109 SPO77YLR341W 1434 nt2.43□□□□□ -2.02
HRD1Q08109 YDR034C-DYDR034C-D 5313 nt2.43□□□□□ -2.02
HRD1Q08109 YDR210W-BYDR210W-B 5313 nt2.43□□□□□ -2.02
HRD1Q08109 YLR410W-BYLR410W-B 5313 nt2.43□□□□□ -2.02
HRD1Q08109 GEA1YJR031C 4227 nt2.43□□□□□ -2.02
HRD1Q08109 YDR239CYDR239C 2364 nt2.43□□□□□ -2.02
HRD1Q08109 GCD14YJL125C 1152 nt2.43□□□□□ -2.02
HRD1Q08109 YJR056CYJR056C 711 nt2.43□□□□□ -2.02
HRD1Q08109 TIS11YLR136C 858 nt2.43□□□□□ -2.02
HRD1Q08109 RPL20AYMR242C 519 nt2.43□□□□□ -2.02
HRD1Q08109 MET6YER091C 2304 nt2.43□□□□□ -2.02
HRD1Q08109 ERG11YHR007C 1593 nt2.43□□□□□ -2.02
HRD1Q08109 ICR1ICR1 3199 nt2.43□□□□□ -2.02
HRD1Q08109 SAD1YFR005C 1347 nt2.42□□□□□ -2.02
HRD1Q08109 MTL1YGR023W 1656 nt2.42□□□□□ -2.02
HRD1Q08109 MMS1YPR164W 4224 nt2.42□□□□□ -2.02
HRD1Q08109 RAD55YDR076W 1221 nt2.42□□□□□ -2.02
HRD1Q08109 YDR133CYDR133C 336 nt2.42□□□□□ -2.02
HRD1Q08109 TLG1YDR468C 675 nt2.42□□□□□ -2.02
HRD1Q08109 HYP2YEL034W 474 nt2.42□□□□□ -2.02
HRD1Q08109 YHR137C-AYHR137C-A 651 nt2.42□□□□□ -2.02
HRD1Q08109 YHR180WYHR180W 492 nt2.42□□□□□ -2.02
HRD1Q08109 YJL028WYJL028W 336 nt2.42□□□□□ -2.02
HRD1Q08109 RPL17BYJL177W 555 nt2.42□□□□□ -2.02
HRD1Q08109 INO4YOL108C 456 nt2.42□□□□□ -2.02
HRD1Q08109 RPL33AYPL143W 324 nt2.42□□□□□ -2.02
HRD1Q08109 ATG29YPL166W 642 nt2.42□□□□□ -2.02
HRD1Q08109 GYP7YDL234C 2241 nt2.42□□□□□ -2.02
HRD1Q08109 TFC4YGR047C 3078 nt2.42□□□□□ -2.02
HRD1Q08109 CDC20YGL116W 1833 nt2.42□□□□□ -2.02
HRD1Q08109 CEP3YMR168C 1827 nt2.42□□□□□ -2.02
HRD1Q08109 PFF1YBR074W 2931 nt2.41□□□□□ -2.02
HRD1Q08109 UTP14YML093W 2700 nt2.41□□□□□ -2.02
HRD1Q08109 YPL216WYPL216W 3309 nt2.41□□□□□ -2.02
HRD1Q08109 EBS1YDR206W 2655 nt2.41□□□□□ -2.02
HRD1Q08109 SEC27YGL137W 2670 nt2.41□□□□□ -2.02
HRD1Q08109 RIM1YCR028C-A 408 nt2.41□□□□□ -2.02
HRD1Q08109 PPH3YDR075W 927 nt2.41□□□□□ -2.02
HRD1Q08109 NKP1YDR383C 717 nt2.41□□□□□ -2.02
HRD1Q08109 SMT3YDR510W 306 nt2.41□□□□□ -2.02
HRD1Q08109 YKR033CYKR033C 426 nt2.41□□□□□ -2.02
HRD1Q08109 YLR365WYLR365W 333 nt2.41□□□□□ -2.02
HRD1Q08109 GLO1YML004C 981 nt2.41□□□□□ -2.02
HRD1Q08109 SMA2YML066C 1110 nt2.41□□□□□ -2.02
HRD1Q08109 MPP6YNR024W 561 nt2.41□□□□□ -2.02
HRD1Q08109 YPR050CYPR050C 414 nt2.41□□□□□ -2.02
HRD1Q08109 TGL1YKL140W 1647 nt2.41□□□□□ -2.02
HRD1Q08109 TLC1TLC1 1301 nt2.41□□□□□ -2.02
HRD1Q08109 YPR148CYPR148C 1308 nt2.41□□□□□ -2.02
HRD1Q08109 DIA2YOR080W 2199 nt2.4□□□□□ -2.02
HRD1Q08109 PUS9YDL036C 1389 nt2.4□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 27 ms