Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.33■□□□□ 0.85
GABREP78334 AC069236.1-201ENST00000604339 616 ntBASIC20.33■□□□□ 0.85
GABREP78334 AC092118.2-201ENST00000613495 667 ntBASIC20.33■□□□□ 0.85
GABREP78334 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.33■□□□□ 0.85
GABREP78334 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
GABREP78334 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.33■□□□□ 0.84
GABREP78334 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
GABREP78334 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GABREP78334 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.33■□□□□ 0.84
GABREP78334 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GABREP78334 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.32■□□□□ 0.84
GABREP78334 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.32■□□□□ 0.84
GABREP78334 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.32■□□□□ 0.84
GABREP78334 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABREP78334 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABREP78334 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABREP78334 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.32■□□□□ 0.84
GABREP78334 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
GABREP78334 AC093787.1-201ENST00000450396 207 ntBASIC20.32■□□□□ 0.84
GABREP78334 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.32■□□□□ 0.84
GABREP78334 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
GABREP78334 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GABREP78334 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.32■□□□□ 0.84
GABREP78334 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.32■□□□□ 0.84
GABREP78334 AC016405.3-201ENST00000607710 860 ntBASIC20.32■□□□□ 0.84
GABREP78334 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
GABREP78334 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABREP78334 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
GABREP78334 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABREP78334 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABREP78334 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
GABREP78334 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABREP78334 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABREP78334 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GABREP78334 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABREP78334 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABREP78334 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.31■□□□□ 0.84
GABREP78334 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.31■□□□□ 0.84
GABREP78334 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABREP78334 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.31■□□□□ 0.84
GABREP78334 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.31■□□□□ 0.84
GABREP78334 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.31■□□□□ 0.84
GABREP78334 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GABREP78334 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABREP78334 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABREP78334 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GABREP78334 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABREP78334 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABREP78334 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.3■□□□□ 0.84
GABREP78334 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.3■□□□□ 0.84
GABREP78334 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
GABREP78334 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABREP78334 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GABREP78334 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABREP78334 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.3■□□□□ 0.84
GABREP78334 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.3■□□□□ 0.84
GABREP78334 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.3■□□□□ 0.84
GABREP78334 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
GABREP78334 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.3■□□□□ 0.84
GABREP78334 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.3■□□□□ 0.84
GABREP78334 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GABREP78334 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABREP78334 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
GABREP78334 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GABREP78334 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
GABREP78334 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.3■□□□□ 0.84
GABREP78334 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
GABREP78334 LINC01960-201ENST00000563759 1884 ntBASIC20.29■□□□□ 0.84
GABREP78334 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GABREP78334 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GABREP78334 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GABREP78334 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
GABREP78334 BX276092.2-201ENST00000417668 665 ntBASIC20.29■□□□□ 0.84
GABREP78334 DUSP5P2-201ENST00000426873 1033 ntBASIC20.29■□□□□ 0.84
GABREP78334 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GABREP78334 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.29■□□□□ 0.84
GABREP78334 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.29■□□□□ 0.84
GABREP78334 AP006294.2-201ENST00000641667 209 ntBASIC20.29■□□□□ 0.84
GABREP78334 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GABREP78334 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GABREP78334 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
GABREP78334 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GABREP78334 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.29■□□□□ 0.84
GABREP78334 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GABREP78334 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GABREP78334 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GABREP78334 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
GABREP78334 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GABREP78334 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
GABREP78334 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.28■□□□□ 0.84
GABREP78334 AL512625.2-201ENST00000417533 625 ntBASIC20.28■□□□□ 0.84
GABREP78334 AC098590.1-201ENST00000468126 897 ntBASIC20.28■□□□□ 0.84
GABREP78334 EEF1DP3-203ENST00000566025 782 ntBASIC20.28■□□□□ 0.84
GABREP78334 AL034346.1-201ENST00000568244 1277 ntBASIC20.28■□□□□ 0.84
GABREP78334 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.28■□□□□ 0.84
GABREP78334 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.28■□□□□ 0.84
GABREP78334 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GABREP78334 OR7E47P-201ENST00000546390 1422 ntBASIC20.27■□□□□ 0.84
GABREP78334 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
GABREP78334 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms