Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.18■□□□□ 0.82
TRA2BP62995 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRA2BP62995 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.18■□□□□ 0.82
TRA2BP62995 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRA2BP62995 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.18■□□□□ 0.82
TRA2BP62995 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRA2BP62995 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRA2BP62995 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRA2BP62995 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.17■□□□□ 0.82
TRA2BP62995 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.17■□□□□ 0.82
TRA2BP62995 AL354811.1-201ENST00000610286 706 ntBASIC20.17■□□□□ 0.82
TRA2BP62995 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.17■□□□□ 0.82
TRA2BP62995 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.17■□□□□ 0.82
TRA2BP62995 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRA2BP62995 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRA2BP62995 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
TRA2BP62995 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRA2BP62995 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRA2BP62995 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRA2BP62995 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRA2BP62995 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRA2BP62995 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
TRA2BP62995 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRA2BP62995 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.16■□□□□ 0.82
TRA2BP62995 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRA2BP62995 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRA2BP62995 AC055733.4-201ENST00000638462 1354 ntBASIC20.16■□□□□ 0.82
TRA2BP62995 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRA2BP62995 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRA2BP62995 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRA2BP62995 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRA2BP62995 AC005224.4-201ENST00000583262 1652 ntBASIC20.16■□□□□ 0.82
TRA2BP62995 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.16■□□□□ 0.82
TRA2BP62995 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.15■□□□□ 0.82
TRA2BP62995 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.15■□□□□ 0.82
TRA2BP62995 AL358852.1-201ENST00000623174 1268 ntBASIC20.15■□□□□ 0.82
TRA2BP62995 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.15■□□□□ 0.82
TRA2BP62995 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TRA2BP62995 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRA2BP62995 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.15■□□□□ 0.82
TRA2BP62995 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.15■□□□□ 0.82
TRA2BP62995 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRA2BP62995 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRA2BP62995 Z98882.1-201ENST00000622160 2253 ntBASIC20.14■□□□□ 0.81
TRA2BP62995 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRA2BP62995 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRA2BP62995 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.14■□□□□ 0.81
TRA2BP62995 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRA2BP62995 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.14■□□□□ 0.81
TRA2BP62995 MIR638-201ENST00000385237 100 ntBASIC20.14■□□□□ 0.81
TRA2BP62995 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRA2BP62995 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.14■□□□□ 0.81
TRA2BP62995 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRA2BP62995 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRA2BP62995 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.14■□□□□ 0.81
TRA2BP62995 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.14■□□□□ 0.81
TRA2BP62995 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRA2BP62995 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRA2BP62995 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.13■□□□□ 0.81
TRA2BP62995 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.13■□□□□ 0.81
TRA2BP62995 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRA2BP62995 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRA2BP62995 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRA2BP62995 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRA2BP62995 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRA2BP62995 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.13■□□□□ 0.81
TRA2BP62995 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.13■□□□□ 0.81
TRA2BP62995 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRA2BP62995 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.13■□□□□ 0.81
TRA2BP62995 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.13■□□□□ 0.81
TRA2BP62995 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.13■□□□□ 0.81
TRA2BP62995 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRA2BP62995 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRA2BP62995 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.12■□□□□ 0.81
TRA2BP62995 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.12■□□□□ 0.81
TRA2BP62995 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRA2BP62995 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
TRA2BP62995 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRA2BP62995 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRA2BP62995 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRA2BP62995 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRA2BP62995 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.12■□□□□ 0.81
TRA2BP62995 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRA2BP62995 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.12■□□□□ 0.81
TRA2BP62995 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.12■□□□□ 0.81
TRA2BP62995 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.12■□□□□ 0.81
TRA2BP62995 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.12■□□□□ 0.81
TRA2BP62995 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.12■□□□□ 0.81
TRA2BP62995 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRA2BP62995 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms