Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB5BP61020 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5BP61020 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAB5BP61020 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5BP61020 AL161729.1-201ENST00000604104 1402 ntBASIC16.76■□□□□ 0.27
RAB5BP61020 PCDHAC2-203ENST00000615316 3011 ntBASIC16.76■□□□□ 0.27
RAB5BP61020 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5BP61020 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5BP61020 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5BP61020 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5BP61020 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB5BP61020 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB5BP61020 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB5BP61020 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB5BP61020 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB5BP61020 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RAB5BP61020 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.75■□□□□ 0.27
RAB5BP61020 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB5BP61020 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB5BP61020 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB5BP61020 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB5BP61020 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB5BP61020 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB5BP61020 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB5BP61020 ALDH1A3-203ENST00000557963 1670 ntBASIC16.75■□□□□ 0.27
RAB5BP61020 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB5BP61020 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB5BP61020 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB5BP61020 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAB5BP61020 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
RAB5BP61020 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB5BP61020 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB5BP61020 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 LTB4R2-202ENST00000528054 3092 ntBASIC16.74■□□□□ 0.27
RAB5BP61020 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB5BP61020 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB5BP61020 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB5BP61020 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAB5BP61020 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB5BP61020 MIR762-201ENST00000390236 83 ntBASIC16.73■□□□□ 0.27
RAB5BP61020 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RAB5BP61020 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB5BP61020 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RAB5BP61020 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB5BP61020 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RAB5BP61020 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB5BP61020 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB5BP61020 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RAB5BP61020 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB5BP61020 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
RAB5BP61020 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB5BP61020 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RAB5BP61020 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB5BP61020 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB5BP61020 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB5BP61020 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB5BP61020 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAB5BP61020 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB5BP61020 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB5BP61020 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RAB5BP61020 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RAB5BP61020 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB5BP61020 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB5BP61020 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB5BP61020 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB5BP61020 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms