Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
WNT3AP56704 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
WNT3AP56704 AC009237.3-201ENST00000393279 1427 ntBASIC21.6■■□□□ 1.05
WNT3AP56704 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
WNT3AP56704 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
WNT3AP56704 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
WNT3AP56704 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
WNT3AP56704 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
WNT3AP56704 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.6■■□□□ 1.05
WNT3AP56704 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
WNT3AP56704 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
WNT3AP56704 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.59■■□□□ 1.05
WNT3AP56704 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
WNT3AP56704 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.59■■□□□ 1.05
WNT3AP56704 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.59■■□□□ 1.05
WNT3AP56704 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.59■■□□□ 1.05
WNT3AP56704 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
WNT3AP56704 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
WNT3AP56704 AC003102.1-202ENST00000563394 1796 ntBASIC21.59■■□□□ 1.05
WNT3AP56704 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
WNT3AP56704 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.58■■□□□ 1.05
WNT3AP56704 AC244015.2-201ENST00000616358 1861 ntBASIC21.58■■□□□ 1.05
WNT3AP56704 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
WNT3AP56704 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.58■■□□□ 1.05
WNT3AP56704 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.58■■□□□ 1.05
WNT3AP56704 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
WNT3AP56704 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.58■■□□□ 1.05
WNT3AP56704 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
WNT3AP56704 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
WNT3AP56704 AL358852.1-201ENST00000623174 1268 ntBASIC21.58■■□□□ 1.05
WNT3AP56704 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.58■■□□□ 1.04
WNT3AP56704 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
WNT3AP56704 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
WNT3AP56704 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.57■■□□□ 1.04
WNT3AP56704 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
WNT3AP56704 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
WNT3AP56704 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.57■■□□□ 1.04
WNT3AP56704 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
WNT3AP56704 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.57■■□□□ 1.04
WNT3AP56704 AC104564.3-201ENST00000582367 638 ntBASIC21.57■■□□□ 1.04
WNT3AP56704 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.57■■□□□ 1.04
WNT3AP56704 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.57■■□□□ 1.04
WNT3AP56704 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.57■■□□□ 1.04
WNT3AP56704 MIR6084-201ENST00000622012 110 ntBASIC21.57■■□□□ 1.04
WNT3AP56704 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
WNT3AP56704 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.57■■□□□ 1.04
WNT3AP56704 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
WNT3AP56704 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
WNT3AP56704 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
WNT3AP56704 AC005224.4-201ENST00000583262 1652 ntBASIC21.56■■□□□ 1.04
WNT3AP56704 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.56■■□□□ 1.04
WNT3AP56704 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
WNT3AP56704 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
WNT3AP56704 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
WNT3AP56704 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
WNT3AP56704 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
WNT3AP56704 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.56■■□□□ 1.04
WNT3AP56704 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.56■■□□□ 1.04
WNT3AP56704 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.56■■□□□ 1.04
WNT3AP56704 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
WNT3AP56704 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
WNT3AP56704 AC055733.4-201ENST00000638462 1354 ntBASIC21.56■■□□□ 1.04
WNT3AP56704 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
WNT3AP56704 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.56■■□□□ 1.04
WNT3AP56704 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
WNT3AP56704 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.56■■□□□ 1.04
WNT3AP56704 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
WNT3AP56704 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
WNT3AP56704 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.55■■□□□ 1.04
WNT3AP56704 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
WNT3AP56704 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
WNT3AP56704 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
WNT3AP56704 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
WNT3AP56704 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
WNT3AP56704 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
WNT3AP56704 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.54■■□□□ 1.04
WNT3AP56704 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.54■■□□□ 1.04
WNT3AP56704 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
WNT3AP56704 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
WNT3AP56704 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
WNT3AP56704 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.54■■□□□ 1.04
WNT3AP56704 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
WNT3AP56704 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
WNT3AP56704 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.54■■□□□ 1.04
WNT3AP56704 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
WNT3AP56704 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.54■■□□□ 1.04
WNT3AP56704 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
WNT3AP56704 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
WNT3AP56704 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
WNT3AP56704 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
WNT3AP56704 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.53■■□□□ 1.04
WNT3AP56704 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
WNT3AP56704 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
WNT3AP56704 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
WNT3AP56704 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
WNT3AP56704 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
WNT3AP56704 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
WNT3AP56704 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
WNT3AP56704 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
WNT3AP56704 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms