Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXA3P55318 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXA3P55318 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXA3P55318 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXA3P55318 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXA3P55318 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXA3P55318 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.96■□□□□ 0.15
FOXA3P55318 OXCT2P1-201ENST00000447263 1535 ntBASIC15.96■□□□□ 0.15
FOXA3P55318 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXA3P55318 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.96■□□□□ 0.15
FOXA3P55318 AC120024.1-201ENST00000562672 995 ntBASIC15.96■□□□□ 0.15
FOXA3P55318 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXA3P55318 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXA3P55318 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXA3P55318 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXA3P55318 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXA3P55318 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXA3P55318 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXA3P55318 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXA3P55318 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXA3P55318 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.14
FOXA3P55318 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
FOXA3P55318 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
FOXA3P55318 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXA3P55318 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXA3P55318 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXA3P55318 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXA3P55318 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXA3P55318 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXA3P55318 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXA3P55318 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXA3P55318 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
FOXA3P55318 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXA3P55318 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXA3P55318 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
FOXA3P55318 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXA3P55318 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXA3P55318 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
FOXA3P55318 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
FOXA3P55318 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXA3P55318 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
FOXA3P55318 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXA3P55318 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXA3P55318 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXA3P55318 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXA3P55318 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXA3P55318 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.94■□□□□ 0.14
FOXA3P55318 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.94■□□□□ 0.14
FOXA3P55318 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
FOXA3P55318 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXA3P55318 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.94■□□□□ 0.14
FOXA3P55318 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXA3P55318 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXA3P55318 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXA3P55318 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXA3P55318 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FOXA3P55318 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
FOXA3P55318 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXA3P55318 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXA3P55318 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FOXA3P55318 KRT18P24-201ENST00000344739 1156 ntBASIC15.93■□□□□ 0.14
FOXA3P55318 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXA3P55318 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXA3P55318 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXA3P55318 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXA3P55318 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXA3P55318 HYI-213ENST00000583037 1322 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXA3P55318 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA3P55318 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
FOXA3P55318 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA3P55318 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA3P55318 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA3P55318 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXA3P55318 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXA3P55318 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms