Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.15■■□□□ 1.78
PDE1AP54750 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE1AP54750 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE1AP54750 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE1AP54750 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
PDE1AP54750 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDE1AP54750 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.14■■□□□ 1.78
PDE1AP54750 BX005040.4-201ENST00000637145 1518 ntBASIC26.14■■□□□ 1.78
PDE1AP54750 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDE1AP54750 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PDE1AP54750 AC105265.2-201ENST00000467189 838 ntBASIC26.14■■□□□ 1.78
PDE1AP54750 AC055733.4-201ENST00000638462 1354 ntBASIC26.14■■□□□ 1.78
PDE1AP54750 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDE1AP54750 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.14■■□□□ 1.78
PDE1AP54750 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.14■■□□□ 1.78
PDE1AP54750 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
PDE1AP54750 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PDE1AP54750 Z98882.1-201ENST00000622160 2253 ntBASIC26.13■■□□□ 1.77
PDE1AP54750 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PDE1AP54750 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PDE1AP54750 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.13■■□□□ 1.77
PDE1AP54750 AC104564.3-201ENST00000582367 638 ntBASIC26.13■■□□□ 1.77
PDE1AP54750 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PDE1AP54750 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PDE1AP54750 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.13■■□□□ 1.77
PDE1AP54750 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.13■■□□□ 1.77
PDE1AP54750 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.13■■□□□ 1.77
PDE1AP54750 AC009237.3-201ENST00000393279 1427 ntBASIC26.13■■□□□ 1.77
PDE1AP54750 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.12■■□□□ 1.77
PDE1AP54750 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.12■■□□□ 1.77
PDE1AP54750 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PDE1AP54750 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PDE1AP54750 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
PDE1AP54750 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.12■■□□□ 1.77
PDE1AP54750 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
PDE1AP54750 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.12■■□□□ 1.77
PDE1AP54750 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PDE1AP54750 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.12■■□□□ 1.77
PDE1AP54750 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDE1AP54750 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDE1AP54750 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.11■■□□□ 1.77
PDE1AP54750 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDE1AP54750 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDE1AP54750 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PDE1AP54750 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.11■■□□□ 1.77
PDE1AP54750 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.11■■□□□ 1.77
PDE1AP54750 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDE1AP54750 AC005224.4-201ENST00000583262 1652 ntBASIC26.11■■□□□ 1.77
PDE1AP54750 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PDE1AP54750 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDE1AP54750 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
PDE1AP54750 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
PDE1AP54750 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PDE1AP54750 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PDE1AP54750 AL137060.1-201ENST00000618151 2648 ntBASIC26.1■■□□□ 1.77
PDE1AP54750 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
PDE1AP54750 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
PDE1AP54750 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PDE1AP54750 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.1■■□□□ 1.77
PDE1AP54750 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.1■■□□□ 1.77
PDE1AP54750 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.1■■□□□ 1.77
PDE1AP54750 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.1■■□□□ 1.77
PDE1AP54750 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PDE1AP54750 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PDE1AP54750 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
PDE1AP54750 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.1■■□□□ 1.77
PDE1AP54750 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.1■■□□□ 1.77
PDE1AP54750 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PDE1AP54750 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDE1AP54750 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.09■■□□□ 1.77
PDE1AP54750 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PDE1AP54750 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.09■■□□□ 1.77
PDE1AP54750 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.09■■□□□ 1.77
PDE1AP54750 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
PDE1AP54750 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.08■■□□□ 1.77
PDE1AP54750 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDE1AP54750 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PDE1AP54750 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PDE1AP54750 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDE1AP54750 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
PDE1AP54750 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
PDE1AP54750 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDE1AP54750 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PDE1AP54750 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.08■■□□□ 1.77
PDE1AP54750 AL354811.1-201ENST00000610286 706 ntBASIC26.08■■□□□ 1.77
PDE1AP54750 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.08■■□□□ 1.77
PDE1AP54750 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.08■■□□□ 1.77
PDE1AP54750 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PDE1AP54750 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC26.08■■□□□ 1.76
PDE1AP54750 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
PDE1AP54750 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.07■■□□□ 1.76
PDE1AP54750 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDE1AP54750 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
PDE1AP54750 IRS3P-201ENST00000223076 1006 ntBASIC26.07■■□□□ 1.76
PDE1AP54750 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDE1AP54750 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.07■■□□□ 1.76
PDE1AP54750 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.07■■□□□ 1.76
PDE1AP54750 TPRG1LP1-201ENST00000598702 760 ntBASIC26.07■■□□□ 1.76
PDE1AP54750 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.07■■□□□ 1.76
PDE1AP54750 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms