Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PMS2P54278 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PMS2P54278 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PMS2P54278 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PMS2P54278 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PMS2P54278 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.98■■□□□ 1.11
PMS2P54278 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.98■■□□□ 1.11
PMS2P54278 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS2P54278 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS2P54278 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.97■■□□□ 1.11
PMS2P54278 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PMS2P54278 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.97■■□□□ 1.11
PMS2P54278 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.97■■□□□ 1.11
PMS2P54278 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.97■■□□□ 1.11
PMS2P54278 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS2P54278 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PMS2P54278 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.96■■□□□ 1.11
PMS2P54278 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.96■■□□□ 1.11
PMS2P54278 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS2P54278 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS2P54278 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
PMS2P54278 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS2P54278 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS2P54278 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.96■■□□□ 1.11
PMS2P54278 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.96■■□□□ 1.11
PMS2P54278 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.96■■□□□ 1.11
PMS2P54278 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PMS2P54278 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS2P54278 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
PMS2P54278 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS2P54278 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PMS2P54278 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PMS2P54278 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS2P54278 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PMS2P54278 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PMS2P54278 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.95■■□□□ 1.11
PMS2P54278 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.95■■□□□ 1.1
PMS2P54278 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
PMS2P54278 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PMS2P54278 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PMS2P54278 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PMS2P54278 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PMS2P54278 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PMS2P54278 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
PMS2P54278 AC104564.3-201ENST00000582367 638 ntBASIC21.95■■□□□ 1.1
PMS2P54278 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PMS2P54278 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.95■■□□□ 1.1
PMS2P54278 AC092667.1-201ENST00000434301 2586 ntBASIC21.95■■□□□ 1.1
PMS2P54278 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PMS2P54278 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS2P54278 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.94■■□□□ 1.1
PMS2P54278 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS2P54278 AL121603.2-201ENST00000557373 2117 ntBASIC21.94■■□□□ 1.1
PMS2P54278 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PMS2P54278 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS2P54278 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.94■■□□□ 1.1
PMS2P54278 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PMS2P54278 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.94■■□□□ 1.1
PMS2P54278 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PMS2P54278 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PMS2P54278 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PMS2P54278 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS2P54278 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS2P54278 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
PMS2P54278 C17orf82-201ENST00000623772 1530 ntBASIC21.94■■□□□ 1.1
PMS2P54278 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.94■■□□□ 1.1
PMS2P54278 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PMS2P54278 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS2P54278 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.94■■□□□ 1.1
PMS2P54278 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PMS2P54278 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS2P54278 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PMS2P54278 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS2P54278 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS2P54278 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.93■■□□□ 1.1
PMS2P54278 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PMS2P54278 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.93■■□□□ 1.1
PMS2P54278 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.93■■□□□ 1.1
PMS2P54278 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PMS2P54278 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.93■■□□□ 1.1
PMS2P54278 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.93■■□□□ 1.1
PMS2P54278 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PMS2P54278 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS2P54278 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS2P54278 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PMS2P54278 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PMS2P54278 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS2P54278 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS2P54278 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS2P54278 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS2P54278 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.92■■□□□ 1.1
PMS2P54278 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PMS2P54278 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.92■■□□□ 1.1
PMS2P54278 AC110285.6-201ENST00000617652 491 ntBASIC21.92■■□□□ 1.1
PMS2P54278 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS2P54278 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS2P54278 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS2P54278 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PMS2P54278 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.92■■□□□ 1.1
PMS2P54278 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms