Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCNKAP51800 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CLCNKAP51800 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCNKAP51800 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCNKAP51800 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.94■□□□□ 0.94
CLCNKAP51800 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.94■□□□□ 0.94
CLCNKAP51800 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCNKAP51800 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.94■□□□□ 0.94
CLCNKAP51800 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.94■□□□□ 0.94
CLCNKAP51800 IKBKGP1-201ENST00000612193 1073 ntBASIC20.94■□□□□ 0.94
CLCNKAP51800 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLCNKAP51800 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCNKAP51800 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLCNKAP51800 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCNKAP51800 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCNKAP51800 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCNKAP51800 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLCNKAP51800 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCNKAP51800 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CLCNKAP51800 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLCNKAP51800 AC242852.2-201ENST00000615738 1807 ntBASIC20.93■□□□□ 0.94
CLCNKAP51800 AC092053.2-201ENST00000640557 1818 ntBASIC20.93■□□□□ 0.94
CLCNKAP51800 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCNKAP51800 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLCNKAP51800 AC006015.1-201ENST00000429970 570 ntBASIC20.93■□□□□ 0.94
CLCNKAP51800 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
CLCNKAP51800 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.93■□□□□ 0.94
CLCNKAP51800 AL137784.2-201ENST00000607332 1000 ntBASIC20.93■□□□□ 0.94
CLCNKAP51800 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLCNKAP51800 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCNKAP51800 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.93■□□□□ 0.94
CLCNKAP51800 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.93■□□□□ 0.94
CLCNKAP51800 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCNKAP51800 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCNKAP51800 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.92■□□□□ 0.94
CLCNKAP51800 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCNKAP51800 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.92■□□□□ 0.94
CLCNKAP51800 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCNKAP51800 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CLCNKAP51800 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCNKAP51800 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
CLCNKAP51800 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.92■□□□□ 0.94
CLCNKAP51800 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCNKAP51800 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.92■□□□□ 0.94
CLCNKAP51800 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.92■□□□□ 0.94
CLCNKAP51800 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.92■□□□□ 0.94
CLCNKAP51800 AC012676.1-201ENST00000574705 1949 ntBASIC20.92■□□□□ 0.94
CLCNKAP51800 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLCNKAP51800 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.91■□□□□ 0.94
CLCNKAP51800 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.91■□□□□ 0.94
CLCNKAP51800 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.91■□□□□ 0.94
CLCNKAP51800 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.91■□□□□ 0.94
CLCNKAP51800 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.91■□□□□ 0.94
CLCNKAP51800 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.91■□□□□ 0.94
CLCNKAP51800 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CLCNKAP51800 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCNKAP51800 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCNKAP51800 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCNKAP51800 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCNKAP51800 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCNKAP51800 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCNKAP51800 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCNKAP51800 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCNKAP51800 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.9■□□□□ 0.94
CLCNKAP51800 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.9■□□□□ 0.94
CLCNKAP51800 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.9■□□□□ 0.94
CLCNKAP51800 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCNKAP51800 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCNKAP51800 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLCNKAP51800 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCNKAP51800 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCNKAP51800 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.89■□□□□ 0.94
CLCNKAP51800 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCNKAP51800 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCNKAP51800 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.89■□□□□ 0.93
CLCNKAP51800 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.89■□□□□ 0.93
CLCNKAP51800 AC137761.2-201ENST00000561729 223 ntBASIC20.89■□□□□ 0.93
CLCNKAP51800 AC145350.3-201ENST00000569033 163 ntBASIC20.89■□□□□ 0.93
CLCNKAP51800 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCNKAP51800 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLCNKAP51800 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCNKAP51800 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCNKAP51800 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCNKAP51800 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCNKAP51800 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCNKAP51800 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCNKAP51800 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CLCNKAP51800 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCNKAP51800 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms