Protein–RNA interactions for Protein: P39900

MMP12, Macrophage metalloelastase, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP12P39900 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP12P39900 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.3■■□□□ 1
MMP12P39900 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.3■■□□□ 1
MMP12P39900 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP12P39900 AC016769.1-201ENST00000409132 1010 ntBASIC21.3■■□□□ 1
MMP12P39900 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.3■■□□□ 1
MMP12P39900 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP12P39900 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MMP12P39900 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP12P39900 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.29■■□□□ 1
MMP12P39900 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.29■■□□□ 1
MMP12P39900 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.29■■□□□ 1
MMP12P39900 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP12P39900 AC004911.1-201ENST00000416316 871 ntBASIC21.29■■□□□ 1
MMP12P39900 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.29■■□□□ 1
MMP12P39900 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.29■■□□□ 1
MMP12P39900 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP12P39900 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP12P39900 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
MMP12P39900 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.29■■□□□ 1
MMP12P39900 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MMP12P39900 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP12P39900 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP12P39900 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MMP12P39900 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MMP12P39900 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP12P39900 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP12P39900 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.28■■□□□ 1
MMP12P39900 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.28■■□□□ 1
MMP12P39900 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MMP12P39900 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.28■■□□□ 1
MMP12P39900 AC138907.5-202ENST00000569484 235 ntBASIC21.28■■□□□ 1
MMP12P39900 AP001160.3-201ENST00000601484 763 ntBASIC21.28■■□□□ 1
MMP12P39900 AC053503.5-201ENST00000601508 636 ntBASIC21.28■■□□□ 1
MMP12P39900 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.28■■□□□ 1
MMP12P39900 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP12P39900 FAM99A-202ENST00000538190 1989 ntBASIC21.28■■□□□ 1
MMP12P39900 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP12P39900 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.28■■□□□ 1
MMP12P39900 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
MMP12P39900 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.27■■□□□ 1
MMP12P39900 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP12P39900 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
MMP12P39900 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP12P39900 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP12P39900 AC010141.2-201ENST00000452426 721 ntBASIC21.27■■□□□ 1
MMP12P39900 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.27■■□□□ 1
MMP12P39900 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.27■■□□□ 1
MMP12P39900 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.27■■□□□ 1
MMP12P39900 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP12P39900 AC003102.1-202ENST00000563394 1796 ntBASIC21.27■■□□□ 1
MMP12P39900 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP12P39900 AC026471.6-201ENST00000622954 1905 ntBASIC21.27■■□□□ 1
MMP12P39900 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MMP12P39900 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.26■□□□□ 0.99
MMP12P39900 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.26■□□□□ 0.99
MMP12P39900 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.26■□□□□ 0.99
MMP12P39900 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.26■□□□□ 0.99
MMP12P39900 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP12P39900 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
MMP12P39900 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.25■□□□□ 0.99
MMP12P39900 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP12P39900 AC012676.1-201ENST00000574705 1949 ntBASIC21.25■□□□□ 0.99
MMP12P39900 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
MMP12P39900 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP12P39900 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP12P39900 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP12P39900 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP12P39900 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP12P39900 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP12P39900 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP12P39900 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
MMP12P39900 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.25■□□□□ 0.99
MMP12P39900 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP12P39900 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
MMP12P39900 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP12P39900 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP12P39900 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP12P39900 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP12P39900 ECEL1P1-201ENST00000373592 1742 ntBASIC21.24■□□□□ 0.99
MMP12P39900 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP12P39900 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP12P39900 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.24■□□□□ 0.99
MMP12P39900 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP12P39900 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP12P39900 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP12P39900 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP12P39900 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms