Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.018e-7■■■□□ 17.5
CSTF2P33240 TMEM14B-203ENST00000460341 565 ntTSL 415.91■□□□□ 0.145e-7■■■□□ 17.5
CSTF2P33240 TMEM14B-206ENST00000463448 1589 ntTSL 1 (best)14.64□□□□□ -0.075e-7■■■□□ 17.5
CSTF2P33240 TMEM14B-209ENST00000473166 752 ntTSL 314.45□□□□□ -0.15e-7■■■□□ 17.5
CSTF2P33240 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.165e-7■■■□□ 17.5
CSTF2P33240 TMEM14B-205ENST00000463100 502 ntTSL 410.69□□□□□ -0.75e-7■■■□□ 17.5
CSTF2P33240 TMEM14B-207ENST00000467229 483 ntTSL 36.45□□□□□ -1.385e-7■■■□□ 17.5
CSTF2P33240 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.99□□□□□ -0.018e-7■■■□□ 17.4
CSTF2P33240 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.64■□□□□ 0.412e-6■■■□□ 17.4
CSTF2P33240 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.02■■□□□ 1.61e-11■■■□□ 17.4
CSTF2P33240 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.68■■□□□ 1.541e-11■■■□□ 17.4
CSTF2P33240 KDM5A-210ENST00000544760 2338 ntTSL 219.68■□□□□ 0.741e-11■■■□□ 17.4
CSTF2P33240 LPP-204ENST00000420410 535 ntTSL 318.69■□□□□ 0.584e-6■■■□□ 17.4
CSTF2P33240 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.574e-6■■■□□ 17.4
CSTF2P33240 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.124e-6■■■□□ 17.4
CSTF2P33240 SRCIN1-212ENST00000613927 1150 ntTSL 315.8■□□□□ 0.124e-6■■■□□ 17.4
CSTF2P33240 RB1-205ENST00000525036 1490 ntTSL 315.01□□□□□ -0.014e-6■■■□□ 17.4
CSTF2P33240 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.35□□□□□ -0.114e-6■■■□□ 17.4
CSTF2P33240 RB1-202ENST00000467505 480 ntTSL 1 (best)14.34□□□□□ -0.114e-6■■■□□ 17.4
CSTF2P33240 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.23□□□□□ -0.131e-11■■■□□ 17.4
CSTF2P33240 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.15□□□□□ -0.144e-6■■■□□ 17.4
CSTF2P33240 LPP-207ENST00000443217 400 ntTSL 313.95□□□□□ -0.184e-6■■■□□ 17.4
CSTF2P33240 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.224e-6■■■□□ 17.4
CSTF2P33240 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.47□□□□□ -0.254e-6■■■□□ 17.4
CSTF2P33240 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.47□□□□□ -0.254e-6■■■□□ 17.4
CSTF2P33240 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.284e-6■■■□□ 17.4
CSTF2P33240 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.34e-6■■■□□ 17.4
CSTF2P33240 KYAT1-207ENST00000462722 2089 ntTSL 1 (best)11.73□□□□□ -0.534e-6■■■□□ 17.4
CSTF2P33240 MTUS1-219ENST00000521772 575 ntTSL 311.43□□□□□ -0.584e-6■■■□□ 17.4
CSTF2P33240 FOXP1-205ENST00000468577 1842 ntTSL 5 BASIC10.93□□□□□ -0.664e-6■■■□□ 17.4
CSTF2P33240 LPP-206ENST00000430340 521 ntTSL 310.24□□□□□ -0.774e-6■■■□□ 17.4
CSTF2P33240 KYAT1-210ENST00000483599 2490 ntTSL 29.96□□□□□ -0.814e-6■■■□□ 17.4
CSTF2P33240 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.824e-6■■■□□ 17.4
CSTF2P33240 AMMECR1L-202ENST00000393001 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.834e-6■■■□□ 17.4
CSTF2P33240 FSD1L-207ENST00000484973 1711 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.91e-11■■■□□ 17.4
CSTF2P33240 SMAD2-205ENST00000586040 1971 ntTSL 5 BASIC9.31□□□□□ -0.924e-6■■■□□ 17.4
CSTF2P33240 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC8.97□□□□□ -0.971e-11■■■□□ 17.4
CSTF2P33240 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.994e-6■■■□□ 17.4
CSTF2P33240 LPP-209ENST00000454789 343 ntTSL 58.75□□□□□ -1.014e-6■■■□□ 17.4
CSTF2P33240 IGF2BP2-210ENST00000494906 918 ntTSL 58.75□□□□□ -1.014e-6■■■□□ 17.4
CSTF2P33240 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.44□□□□□ -1.061e-11■■■□□ 17.4
CSTF2P33240 PKP4-210ENST00000480171 2772 ntTSL 28.3□□□□□ -1.085e-8■■■□□ 17.4
CSTF2P33240 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.091e-11■■■□□ 17.4
CSTF2P33240 ERBIN-211ENST00000507490 337 ntTSL 36.92□□□□□ -1.34e-6■■■□□ 17.4
CSTF2P33240 LPP-201ENST00000414139 502 ntTSL 46.86□□□□□ -1.314e-6■■■□□ 17.4
CSTF2P33240 LPP-205ENST00000426274 386 ntTSL 56.8□□□□□ -1.324e-6■■■□□ 17.4
CSTF2P33240 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.72□□□□□ -1.334e-6■■■□□ 17.4
CSTF2P33240 MTUS1-226ENST00000524044 567 ntTSL 46.61□□□□□ -1.354e-6■■■□□ 17.4
CSTF2P33240 KDM5A-202ENST00000535014 551 ntTSL 46.54□□□□□ -1.361e-11■■■□□ 17.4
CSTF2P33240 MTUS1-205ENST00000517413 4303 ntTSL 26.44□□□□□ -1.384e-6■■■□□ 17.4
CSTF2P33240 LPP-210ENST00000457242 479 ntTSL 26.29□□□□□ -1.44e-6■■■□□ 17.4
CSTF2P33240 MTUS1-222ENST00000522757 490 ntTSL 46.2□□□□□ -1.424e-6■■■□□ 17.4
CSTF2P33240 MTUS1-207ENST00000517818 578 ntTSL 46.2□□□□□ -1.424e-6■■■□□ 17.4
CSTF2P33240 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.7□□□□□ -1.54e-6■■■□□ 17.4
CSTF2P33240 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.614e-6■■■□□ 17.4
CSTF2P33240 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.95□□□□□ -1.624e-6■■■□□ 17.4
CSTF2P33240 KDM5A-204ENST00000536014 558 ntTSL 44.83□□□□□ -1.641e-11■■■□□ 17.4
CSTF2P33240 MTUS1-217ENST00000520196 5205 ntTSL 1 (best)4.82□□□□□ -1.644e-6■■■□□ 17.4
CSTF2P33240 MTUS1-209ENST00000518713 1162 ntTSL 54.73□□□□□ -1.654e-6■■■□□ 17.4
CSTF2P33240 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.664e-6■■■□□ 17.4
CSTF2P33240 MTUS1-227ENST00000524371 564 ntTSL 44.58□□□□□ -1.684e-6■■■□□ 17.4
CSTF2P33240 PDLIM5-214ENST00000510099 554 ntTSL 44.42□□□□□ -1.74e-6■■■□□ 17.4
CSTF2P33240 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.14□□□□□ -1.754e-6■■■□□ 17.4
CSTF2P33240 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.774e-6■■■□□ 17.4
CSTF2P33240 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.78□□□□□ -1.84e-6■■■□□ 17.4
CSTF2P33240 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.65□□□□□ -1.834e-6■■■□□ 17.4
CSTF2P33240 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.874e-6■■■□□ 17.4
CSTF2P33240 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.874e-6■■■□□ 17.4
CSTF2P33240 FOXN3-207ENST00000555010 340 ntTSL 52.77□□□□□ -1.971e-11■■■□□ 17.4
CSTF2P33240 FSD1L-205ENST00000480279 566 ntTSL 32.72□□□□□ -1.971e-11■■■□□ 17.4
CSTF2P33240 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.49□□□□□ -2.014e-6■■■□□ 17.4
CSTF2P33240 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.77■□□□□ 0.921e-6■■■□□ 17.4
CSTF2P33240 MBNL3-207ENST00000421707 946 ntTSL 512.49□□□□□ -0.411e-6■■■□□ 17.4
CSTF2P33240 MBNL3-208ENST00000436215 891 ntTSL 35.6□□□□□ -1.511e-6■■■□□ 17.4
CSTF2P33240 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.31■□□□□ 0.681e-6■■■□□ 17.4
CSTF2P33240 AGAP1-206ENST00000418654 826 ntTSL 39.06□□□□□ -0.961e-6■■■□□ 17.4
CSTF2P33240 PUM2-211ENST00000446940 525 ntTSL 414.3□□□□□ -0.121e-9■■■□□ 17.3
CSTF2P33240 PUM2-206ENST00000424110 546 ntTSL 413.77□□□□□ -0.211e-9■■■□□ 17.3
CSTF2P33240 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.45□□□□□ -0.421e-9■■■□□ 17.3
CSTF2P33240 PUM2-204ENST00000403432 3594 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.671e-9■■■□□ 17.3
CSTF2P33240 PUM2-210ENST00000442400 955 ntTSL 57.96□□□□□ -1.141e-9■■■□□ 17.3
CSTF2P33240 PUM2-207ENST00000429419 547 ntTSL 55.91□□□□□ -1.461e-9■■■□□ 17.3
CSTF2P33240 PUM2-208ENST00000432105 584 ntTSL 54.64□□□□□ -1.671e-9■■■□□ 17.3
CSTF2P33240 PUM2-205ENST00000420234 562 ntTSL 54.55□□□□□ -1.681e-9■■■□□ 17.3
CSTF2P33240 RPL17-223ENST00000618613 856 ntAPPRIS P1 TSL 316.64■□□□□ 0.252e-11■■■□□ 17.3
CSTF2P33240 RPL17-219ENST00000584364 523 ntTSL 24.22□□□□□ -1.732e-11■■■□□ 17.3
CSTF2P33240 ATF7IP2-205ENST00000535850 1907 ntTSL 29.92□□□□□ -0.825e-8■■■□□ 17.3
CSTF2P33240 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.57□□□□□ -1.365e-8■■■□□ 17.3
CSTF2P33240 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.375e-8■■■□□ 17.3
CSTF2P33240 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.25□□□□□ -1.735e-8■■■□□ 17.3
CSTF2P33240 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.175e-7■■■□□ 17.3
CSTF2P33240 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.334e-8■■■□□ 17.3
CSTF2P33240 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.384e-8■■■□□ 17.3
CSTF2P33240 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.444e-8■■■□□ 17.3
CSTF2P33240 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.464e-8■■■□□ 17.3
CSTF2P33240 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.764e-8■■■□□ 17.3
CSTF2P33240 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.934e-8■■■□□ 17.3
CSTF2P33240 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.6□□□□□ -1.354e-8■■■□□ 17.3
CSTF2P33240 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.544e-8■■■□□ 17.3
CSTF2P33240 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.19□□□□□ -1.584e-8■■■□□ 17.3
Retrieved 100 of 6,735 protein–RNA pairs in 48.2 ms