Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC28.52■■■□□ 2.16
RXRBP28702 MIR4785-201ENST00000585005 73 ntBASIC28.52■■■□□ 2.16
RXRBP28702 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC28.52■■■□□ 2.16
RXRBP28702 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RXRBP28702 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RXRBP28702 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.51■■■□□ 2.16
RXRBP28702 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RXRBP28702 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
RXRBP28702 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RXRBP28702 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
RXRBP28702 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RXRBP28702 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC28.51■■■□□ 2.15
RXRBP28702 RNF146-204ENST00000476956 884 ntTSL 2 BASIC28.51■■■□□ 2.15
RXRBP28702 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC28.51■■■□□ 2.15
RXRBP28702 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
RXRBP28702 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC28.51■■■□□ 2.15
RXRBP28702 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
RXRBP28702 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
RXRBP28702 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC28.51■■■□□ 2.15
RXRBP28702 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.51■■■□□ 2.15
RXRBP28702 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.51■■■□□ 2.15
RXRBP28702 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.51■■■□□ 2.15
RXRBP28702 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC28.5■■■□□ 2.15
RXRBP28702 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RXRBP28702 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RXRBP28702 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC28.5■■■□□ 2.15
RXRBP28702 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC28.5■■■□□ 2.15
RXRBP28702 AL049637.2-201ENST00000641778 930 ntBASIC28.5■■■□□ 2.15
RXRBP28702 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.5■■■□□ 2.15
RXRBP28702 AC142086.6-201ENST00000621154 1765 ntBASIC28.5■■■□□ 2.15
RXRBP28702 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
RXRBP28702 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RXRBP28702 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RXRBP28702 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RXRBP28702 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC28.49■■■□□ 2.15
RXRBP28702 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC28.49■■■□□ 2.15
RXRBP28702 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC28.49■■■□□ 2.15
RXRBP28702 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC28.49■■■□□ 2.15
RXRBP28702 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC28.49■■■□□ 2.15
RXRBP28702 AC069544.1-201ENST00000609399 999 ntBASIC28.49■■■□□ 2.15
RXRBP28702 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RXRBP28702 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
RXRBP28702 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
RXRBP28702 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.48■■■□□ 2.15
RXRBP28702 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
RXRBP28702 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
RXRBP28702 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC28.48■■■□□ 2.15
RXRBP28702 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC28.48■■■□□ 2.15
RXRBP28702 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
RXRBP28702 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC28.48■■■□□ 2.15
RXRBP28702 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
RXRBP28702 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC28.48■■■□□ 2.15
RXRBP28702 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
RXRBP28702 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RXRBP28702 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC28.48■■■□□ 2.15
RXRBP28702 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
RXRBP28702 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC28.47■■■□□ 2.15
RXRBP28702 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RXRBP28702 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC28.47■■■□□ 2.15
RXRBP28702 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
RXRBP28702 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RXRBP28702 PNMA6B-201ENST00000538162 1200 ntBASIC28.47■■■□□ 2.15
RXRBP28702 AP001412.1-201ENST00000608405 714 ntBASIC28.47■■■□□ 2.15
RXRBP28702 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.47■■■□□ 2.15
RXRBP28702 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RXRBP28702 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
RXRBP28702 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC28.46■■■□□ 2.15
RXRBP28702 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.46■■■□□ 2.15
RXRBP28702 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC28.46■■■□□ 2.15
RXRBP28702 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.46■■■□□ 2.15
RXRBP28702 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
RXRBP28702 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC28.45■■■□□ 2.15
RXRBP28702 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC28.45■■■□□ 2.14
RXRBP28702 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC28.45■■■□□ 2.14
RXRBP28702 EEF1DP3-203ENST00000566025 782 ntBASIC28.45■■■□□ 2.14
RXRBP28702 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
RXRBP28702 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
RXRBP28702 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.44■■■□□ 2.14
RXRBP28702 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
RXRBP28702 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
RXRBP28702 PBX1-209ENST00000485769 834 ntTSL 2 BASIC28.44■■■□□ 2.14
RXRBP28702 SNX21-213ENST00000614929 587 ntTSL 5 BASIC28.44■■■□□ 2.14
RXRBP28702 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RXRBP28702 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC28.43■■■□□ 2.14
RXRBP28702 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.43■■■□□ 2.14
RXRBP28702 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.43■■■□□ 2.14
RXRBP28702 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
RXRBP28702 ISG20-202ENST00000379224 540 ntTSL 3 BASIC28.43■■■□□ 2.14
RXRBP28702 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC28.43■■■□□ 2.14
RXRBP28702 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RXRBP28702 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RXRBP28702 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RXRBP28702 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC28.43■■■□□ 2.14
RXRBP28702 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RXRBP28702 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.42■■■□□ 2.14
RXRBP28702 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RXRBP28702 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
RXRBP28702 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC28.42■■■□□ 2.14
RXRBP28702 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
RXRBP28702 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC28.42■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms