Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD40P25942 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.43■□□□□ 0.54
CD40P25942 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CD40P25942 AC138907.5-202ENST00000569484 235 ntBASIC18.43■□□□□ 0.54
CD40P25942 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.43■□□□□ 0.54
CD40P25942 AC011767.1-201ENST00000617410 1153 ntBASIC18.43■□□□□ 0.54
CD40P25942 AC073111.5-205ENST00000641717 521 ntBASIC18.43■□□□□ 0.54
CD40P25942 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD40P25942 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD40P25942 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD40P25942 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.43■□□□□ 0.54
CD40P25942 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.43■□□□□ 0.54
CD40P25942 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.42■□□□□ 0.54
CD40P25942 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.42■□□□□ 0.54
CD40P25942 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD40P25942 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD40P25942 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CD40P25942 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD40P25942 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CD40P25942 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD40P25942 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD40P25942 CDCA4P2-201ENST00000441182 718 ntBASIC18.42■□□□□ 0.54
CD40P25942 AC010141.2-201ENST00000452426 721 ntBASIC18.42■□□□□ 0.54
CD40P25942 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.42■□□□□ 0.54
CD40P25942 EEF1DP3-203ENST00000566025 782 ntBASIC18.42■□□□□ 0.54
CD40P25942 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.42■□□□□ 0.54
CD40P25942 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD40P25942 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD40P25942 AC080038.3-201ENST00000623346 1952 ntBASIC18.42■□□□□ 0.54
CD40P25942 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.42■□□□□ 0.54
CD40P25942 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD40P25942 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.42■□□□□ 0.54
CD40P25942 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD40P25942 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD40P25942 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD40P25942 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD40P25942 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD40P25942 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD40P25942 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.41■□□□□ 0.54
CD40P25942 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.41■□□□□ 0.54
CD40P25942 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD40P25942 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.41■□□□□ 0.54
CD40P25942 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.41■□□□□ 0.54
CD40P25942 AC053503.5-201ENST00000601508 636 ntBASIC18.41■□□□□ 0.54
CD40P25942 AC092053.2-201ENST00000640557 1818 ntBASIC18.41■□□□□ 0.54
CD40P25942 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CD40P25942 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD40P25942 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.41■□□□□ 0.54
CD40P25942 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD40P25942 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD40P25942 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD40P25942 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD40P25942 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.4■□□□□ 0.54
CD40P25942 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.4■□□□□ 0.54
CD40P25942 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.4■□□□□ 0.54
CD40P25942 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.4■□□□□ 0.54
CD40P25942 UBE2DNL-204ENST00000602536 740 ntBASIC18.4■□□□□ 0.54
CD40P25942 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD40P25942 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD40P25942 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD40P25942 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CD40P25942 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CD40P25942 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.4■□□□□ 0.54
CD40P25942 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CD40P25942 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CD40P25942 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.39■□□□□ 0.54
CD40P25942 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.39■□□□□ 0.53
CD40P25942 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.39■□□□□ 0.53
CD40P25942 AC026185.1-201ENST00000445748 174 ntBASIC18.39■□□□□ 0.53
CD40P25942 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.39■□□□□ 0.53
CD40P25942 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.39■□□□□ 0.53
CD40P25942 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 MFSD11-216ENST00000590393 1141 ntBASIC18.39■□□□□ 0.53
CD40P25942 RAP2CP1-201ENST00000605103 478 ntBASIC18.39■□□□□ 0.53
CD40P25942 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.39■□□□□ 0.53
CD40P25942 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD40P25942 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
CD40P25942 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD40P25942 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CD40P25942 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.38■□□□□ 0.53
CD40P25942 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD40P25942 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CD40P25942 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD40P25942 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD40P25942 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.38■□□□□ 0.53
CD40P25942 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CD40P25942 KRT18P20-201ENST00000548986 1279 ntBASIC18.38■□□□□ 0.53
CD40P25942 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.38■□□□□ 0.53
CD40P25942 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.38■□□□□ 0.53
CD40P25942 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD40P25942 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms