Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 RUF5-2RUF5-2 710 nt4.1□□□□□ -1.75
MSH1P25846 YOR238WYOR238W 912 nt4.1□□□□□ -1.75
MSH1P25846 YPR136CYPR136C 513 nt4.1□□□□□ -1.75
MSH1P25846 MIG1YGL035C 1515 nt4.1□□□□□ -1.75
MSH1P25846 NAT1YDL040C 2565 nt4.09□□□□□ -1.75
MSH1P25846 OAF3YKR064W 2592 nt4.09□□□□□ -1.75
MSH1P25846 GCD2YGR083C 1956 nt4.09□□□□□ -1.75
MSH1P25846 RPL13AYDL082W 600 nt4.09□□□□□ -1.75
MSH1P25846 MSW1YDR268W 1140 nt4.09□□□□□ -1.75
MSH1P25846 GUK1YDR454C 564 nt4.09□□□□□ -1.75
MSH1P25846 YDR491CYDR491C 492 nt4.09□□□□□ -1.75
MSH1P25846 YIR014WYIR014W 729 nt4.09□□□□□ -1.75
MSH1P25846 FDH2YPL275W 711 nt4.09□□□□□ -1.75
MSH1P25846 YBR103C-AYBR103C-A 144 nt4.09□□□□□ -1.75
MSH1P25846 PHO88YBR106W 567 nt4.09□□□□□ -1.75
MSH1P25846 CBP6YBR120C 489 nt4.09□□□□□ -1.75
MSH1P25846 KIN3YAR018C 1308 nt4.09□□□□□ -1.75
MSH1P25846 NUR1YDL089W 1455 nt4.09□□□□□ -1.75
MSH1P25846 YGL176CYGL176C 1665 nt4.09□□□□□ -1.76
MSH1P25846 PRP22YER013W 3438 nt4.08□□□□□ -1.76
MSH1P25846 YDR261W-AYDR261W-A 1317 nt4.08□□□□□ -1.76
MSH1P25846 MSM1YGR171C 1728 nt4.08□□□□□ -1.76
MSH1P25846 MRPL3YMR024W 1173 nt4.08□□□□□ -1.76
MSH1P25846 YPL035CYPL035C 348 nt4.08□□□□□ -1.76
MSH1P25846 ATG21YPL100W 1491 nt4.08□□□□□ -1.76
MSH1P25846 MED8YBR193C 672 nt4.08□□□□□ -1.76
MSH1P25846 BMS1YPL217C 3552 nt4.07□□□□□ -1.76
MSH1P25846 STE24YJR117W 1362 nt4.07□□□□□ -1.76
MSH1P25846 PDS1YDR113C 1122 nt4.07□□□□□ -1.76
MSH1P25846 YKE4YIL023C 1041 nt4.07□□□□□ -1.76
MSH1P25846 ERG29YMR134W 714 nt4.07□□□□□ -1.76
MSH1P25846 HUB1YNR032C-A 222 nt4.07□□□□□ -1.76
MSH1P25846 YDL199CYDL199C 2064 nt4.07□□□□□ -1.76
MSH1P25846 KIP3YGL216W 2418 nt4.06□□□□□ -1.76
MSH1P25846 RSC58YLR033W 1509 nt4.06□□□□□ -1.76
MSH1P25846 NUP85YJR042W 2235 nt4.06□□□□□ -1.76
MSH1P25846 snR83snR83 306 nt4.06□□□□□ -1.76
MSH1P25846 SPT4YGR063C 309 nt4.06□□□□□ -1.76
MSH1P25846 PTI1YGR156W 1278 nt4.06□□□□□ -1.76
MSH1P25846 FOL2YGR267C 732 nt4.06□□□□□ -1.76
MSH1P25846 SRP40YKR092C 1221 nt4.06□□□□□ -1.76
MSH1P25846 RPS30AYLR287C-A 192 nt4.06□□□□□ -1.76
MSH1P25846 LDS2YOL047C 1071 nt4.06□□□□□ -1.76
MSH1P25846 MRPS9YBR146W 837 nt4.06□□□□□ -1.76
MSH1P25846 YRM1YOR172W 2361 nt4.06□□□□□ -1.76
MSH1P25846 PHO5YBR093C 1404 nt4.05□□□□□ -1.76
MSH1P25846 VID27YNL212W 2349 nt4.05□□□□□ -1.76
MSH1P25846 SLY41YOR307C 1362 nt4.05□□□□□ -1.76
MSH1P25846 HUL5YGL141W 2733 nt4.05□□□□□ -1.76
MSH1P25846 GPM2YDL021W 936 nt4.05□□□□□ -1.76
MSH1P25846 TMA17YDL110C 453 nt4.05□□□□□ -1.76
MSH1P25846 MRPL11YDL202W 750 nt4.05□□□□□ -1.76
MSH1P25846 YDR246W-AYDR246W-A 201 nt4.05□□□□□ -1.76
MSH1P25846 YEA4YEL004W 1029 nt4.05□□□□□ -1.76
MSH1P25846 BUD25YER014C-A 462 nt4.05□□□□□ -1.76
MSH1P25846 YGL074CYGL074C 327 nt4.05□□□□□ -1.76
MSH1P25846 YGR114CYGR114C 390 nt4.05□□□□□ -1.76
MSH1P25846 DOG1YHR044C 741 nt4.05□□□□□ -1.76
MSH1P25846 THP2YHR167W 786 nt4.05□□□□□ -1.76
MSH1P25846 MIC27YNL100W 705 nt4.05□□□□□ -1.76
MSH1P25846 RRP36YOR287C 903 nt4.05□□□□□ -1.76
MSH1P25846 CIN2YPL241C 807 nt4.05□□□□□ -1.76
MSH1P25846 DSS4YPR017C 432 nt4.05□□□□□ -1.76
MSH1P25846 DIB1YPR082C 432 nt4.05□□□□□ -1.76
MSH1P25846 AI4Q0065 1671 nt4.05□□□□□ -1.76
MSH1P25846 YML096WYML096W 1578 nt4.05□□□□□ -1.76
MSH1P25846 CHD1YER164W 4407 nt4.05□□□□□ -1.76
MSH1P25846 APM3YBR288C 1452 nt4.05□□□□□ -1.76
MSH1P25846 QRI7YDL104C 1224 nt4.04□□□□□ -1.76
MSH1P25846 PET100YDR079W 336 nt4.04□□□□□ -1.76
MSH1P25846 MAG1YER142C 891 nt4.04□□□□□ -1.76
MSH1P25846 COG7YGL005C 840 nt4.04□□□□□ -1.76
MSH1P25846 YGR051CYGR051C 324 nt4.04□□□□□ -1.76
MSH1P25846 IKI1YHR187W 930 nt4.04□□□□□ -1.76
MSH1P25846 SWD2YKL018W 990 nt4.04□□□□□ -1.76
MSH1P25846 MRPL20YKR085C 588 nt4.04□□□□□ -1.76
MSH1P25846 TPM1YNL079C 600 nt4.04□□□□□ -1.76
MSH1P25846 YPR059CYPR059C 387 nt4.04□□□□□ -1.76
MSH1P25846 APL4YPR029C 2499 nt4.04□□□□□ -1.76
MSH1P25846 PEP7YDR323C 1548 nt4.04□□□□□ -1.76
MSH1P25846 YKL050CYKL050C 2769 nt4.03□□□□□ -1.76
MSH1P25846 RPS29BYDL061C 171 nt4.03□□□□□ -1.76
MSH1P25846 ECM11YDR446W 909 nt4.03□□□□□ -1.76
MSH1P25846 EST3YIL009C-A 546 nt4.03□□□□□ -1.76
MSH1P25846 POG1YIL122W 1056 nt4.03□□□□□ -1.76
MSH1P25846 YJL032WYJL032W 315 nt4.03□□□□□ -1.76
MSH1P25846 YPT6YLR262C 648 nt4.03□□□□□ -1.76
MSH1P25846 ARG80YMR042W 534 nt4.03□□□□□ -1.76
MSH1P25846 SAS5YOR213C 747 nt4.03□□□□□ -1.76
MSH1P25846 SNF8YPL002C 702 nt4.03□□□□□ -1.76
MSH1P25846 ASI1YMR119W 1875 nt4.03□□□□□ -1.77
MSH1P25846 YLR352WYLR352W 2424 nt4.02□□□□□ -1.77
MSH1P25846 YDL162CYDL162C 357 nt4.02□□□□□ -1.77
MSH1P25846 UBC5YDR059C 447 nt4.02□□□□□ -1.77
MSH1P25846 AIM7YDR063W 450 nt4.02□□□□□ -1.77
MSH1P25846 FMP10YER182W 735 nt4.02□□□□□ -1.77
MSH1P25846 CTK2YJL006C 972 nt4.02□□□□□ -1.77
MSH1P25846 SNX4YJL036W 1272 nt4.02□□□□□ -1.77
MSH1P25846 CSI1YMR025W 888 nt4.02□□□□□ -1.77
MSH1P25846 YBR287WYBR287W 1284 nt4.02□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 68.7 ms