Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC080038.3-201ENST00000623346 1952 ntBASIC21.5■■□□□ 1.03
XPAP23025 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.5■■□□□ 1.03
XPAP23025 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.5■■□□□ 1.03
XPAP23025 AC055733.4-201ENST00000638462 1354 ntBASIC21.5■■□□□ 1.03
XPAP23025 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
XPAP23025 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XPAP23025 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.5■■□□□ 1.03
XPAP23025 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.5■■□□□ 1.03
XPAP23025 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.5■■□□□ 1.03
XPAP23025 KRT19P1-201ENST00000405746 1186 ntBASIC21.5■■□□□ 1.03
XPAP23025 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XPAP23025 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.5■■□□□ 1.03
XPAP23025 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.5■■□□□ 1.03
XPAP23025 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
XPAP23025 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.5■■□□□ 1.03
XPAP23025 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XPAP23025 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
XPAP23025 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
XPAP23025 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.5■■□□□ 1.03
XPAP23025 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
XPAP23025 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
XPAP23025 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XPAP23025 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.5■■□□□ 1.03
XPAP23025 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
XPAP23025 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.5■■□□□ 1.03
XPAP23025 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
XPAP23025 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
XPAP23025 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.49■■□□□ 1.03
XPAP23025 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
XPAP23025 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
XPAP23025 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
XPAP23025 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
XPAP23025 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
XPAP23025 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
XPAP23025 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.49■■□□□ 1.03
XPAP23025 AL137784.2-201ENST00000607332 1000 ntBASIC21.49■■□□□ 1.03
XPAP23025 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.49■■□□□ 1.03
XPAP23025 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.49■■□□□ 1.03
XPAP23025 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
XPAP23025 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
XPAP23025 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
XPAP23025 AP004607.4-201ENST00000530158 1459 ntBASIC21.49■■□□□ 1.03
XPAP23025 AP006587.3-201ENST00000525742 1516 ntBASIC21.49■■□□□ 1.03
XPAP23025 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.48■■□□□ 1.03
XPAP23025 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.48■■□□□ 1.03
XPAP23025 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
XPAP23025 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
XPAP23025 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.48■■□□□ 1.03
XPAP23025 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
XPAP23025 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
XPAP23025 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.48■■□□□ 1.03
XPAP23025 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.48■■□□□ 1.03
XPAP23025 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.48■■□□□ 1.03
XPAP23025 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.48■■□□□ 1.03
XPAP23025 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.48■■□□□ 1.03
XPAP23025 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
XPAP23025 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
XPAP23025 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.48■■□□□ 1.03
XPAP23025 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.48■■□□□ 1.03
XPAP23025 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.48■■□□□ 1.03
XPAP23025 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
XPAP23025 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
XPAP23025 AC016769.1-201ENST00000409132 1010 ntBASIC21.47■■□□□ 1.03
XPAP23025 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
XPAP23025 AC137761.2-201ENST00000561729 223 ntBASIC21.47■■□□□ 1.03
XPAP23025 AC145350.3-201ENST00000569033 163 ntBASIC21.47■■□□□ 1.03
XPAP23025 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.47■■□□□ 1.03
XPAP23025 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
XPAP23025 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
XPAP23025 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
XPAP23025 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
XPAP23025 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
XPAP23025 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.46■■□□□ 1.03
XPAP23025 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
XPAP23025 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
XPAP23025 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
XPAP23025 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
XPAP23025 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.46■■□□□ 1.03
XPAP23025 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
XPAP23025 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.46■■□□□ 1.03
XPAP23025 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
XPAP23025 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
XPAP23025 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.46■■□□□ 1.03
XPAP23025 AC068473.5-201ENST00000616428 2072 ntBASIC21.46■■□□□ 1.03
XPAP23025 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
XPAP23025 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.46■■□□□ 1.03
XPAP23025 AC092053.2-201ENST00000640557 1818 ntBASIC21.45■■□□□ 1.03
XPAP23025 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.45■■□□□ 1.02
XPAP23025 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
XPAP23025 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.45■■□□□ 1.02
XPAP23025 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
XPAP23025 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
XPAP23025 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.45■■□□□ 1.02
XPAP23025 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
XPAP23025 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.45■■□□□ 1.02
XPAP23025 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.45■■□□□ 1.02
XPAP23025 IKBKGP1-201ENST00000612193 1073 ntBASIC21.45■■□□□ 1.02
XPAP23025 AC233723.2-201ENST00000623798 2106 ntBASIC21.45■■□□□ 1.02
XPAP23025 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
XPAP23025 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms