Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD53P19397 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.3■□□□□ 0.68
CD53P19397 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD53P19397 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD53P19397 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD53P19397 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.3■□□□□ 0.68
CD53P19397 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 SLC25A24-204ENST00000569674 2357 ntBASIC19.29■□□□□ 0.68
CD53P19397 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.29■□□□□ 0.68
CD53P19397 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CD53P19397 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.29■□□□□ 0.68
CD53P19397 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.29■□□□□ 0.68
CD53P19397 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.29■□□□□ 0.68
CD53P19397 SLC47A1P1-202ENST00000449666 945 ntBASIC19.29■□□□□ 0.68
CD53P19397 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.29■□□□□ 0.68
CD53P19397 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.29■□□□□ 0.68
CD53P19397 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
CD53P19397 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.29■□□□□ 0.68
CD53P19397 AC092437.1-201ENST00000624794 1048 ntBASIC19.29■□□□□ 0.68
CD53P19397 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.29■□□□□ 0.68
CD53P19397 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.29■□□□□ 0.68
CD53P19397 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD53P19397 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CD53P19397 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CD53P19397 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD53P19397 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.28■□□□□ 0.68
CD53P19397 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD53P19397 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CD53P19397 DUX4L2-201ENST00000561772 1275 ntBASIC19.28■□□□□ 0.68
CD53P19397 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.28■□□□□ 0.68
CD53P19397 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.28■□□□□ 0.68
CD53P19397 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.28■□□□□ 0.68
CD53P19397 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
CD53P19397 DUX4L6-201ENST00000626483 1275 ntBASIC19.28■□□□□ 0.68
CD53P19397 DUX4L1-201ENST00000627662 1275 ntBASIC19.28■□□□□ 0.68
CD53P19397 DUX4L8-201ENST00000629013 1275 ntBASIC19.28■□□□□ 0.68
CD53P19397 DUX4L3-201ENST00000630187 1275 ntBASIC19.28■□□□□ 0.68
CD53P19397 DUX4L7-201ENST00000630678 1275 ntBASIC19.28■□□□□ 0.68
CD53P19397 DUX4L5-201ENST00000630834 1275 ntBASIC19.28■□□□□ 0.68
CD53P19397 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.28■□□□□ 0.68
CD53P19397 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.28■□□□□ 0.68
CD53P19397 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD53P19397 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD53P19397 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD53P19397 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CD53P19397 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD53P19397 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.28■□□□□ 0.68
CD53P19397 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD53P19397 TSPY26P-201ENST00000476365 1326 ntBASIC19.27■□□□□ 0.68
CD53P19397 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.27■□□□□ 0.68
CD53P19397 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD53P19397 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD53P19397 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD53P19397 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD53P19397 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CD53P19397 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.27■□□□□ 0.68
CD53P19397 pRNA.6-201ENST00000610482 90 ntBASIC19.27■□□□□ 0.68
CD53P19397 pRNA.5-201ENST00000612139 90 ntBASIC19.27■□□□□ 0.68
CD53P19397 pRNA.11-201ENST00000618423 90 ntBASIC19.27■□□□□ 0.68
CD53P19397 pRNA.13-201ENST00000619112 90 ntBASIC19.27■□□□□ 0.68
CD53P19397 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CD53P19397 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CD53P19397 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.27■□□□□ 0.68
CD53P19397 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.27■□□□□ 0.68
CD53P19397 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
CD53P19397 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CD53P19397 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CD53P19397 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CD53P19397 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD53P19397 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD53P19397 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CD53P19397 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD53P19397 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.26■□□□□ 0.67
CD53P19397 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.26■□□□□ 0.67
CD53P19397 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD53P19397 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD53P19397 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CD53P19397 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CD53P19397 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD53P19397 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CD53P19397 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.26■□□□□ 0.67
CD53P19397 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CD53P19397 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CD53P19397 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD53P19397 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD53P19397 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.25■□□□□ 0.67
CD53P19397 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD53P19397 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD53P19397 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD53P19397 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CD53P19397 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms